RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.16
COL6A5-202ENST00000312481 HES4Q9HCC6 221 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 OR1A1Q9P1Q5 309 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 GABRA4P48169 554 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 IGLV3-21P80748 117 aaPredicted RBP7.77□□□□□ -1.17
COL6A5-202ENST00000312481 RASL11AQ6T310 242 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM91Q6ZNR0 172 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 NPRL2Q8WTW4 380 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CTHRC1Q96CG8 243 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 NAT8BQ9UHF3 227 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 ING1Q9UK53 422 aaPredicted RBP7.77□□□□□ -1.17
COL6A5-202ENST00000312481 TRAV1-1A0A0B4J248 108 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 WDR1O75083 606 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 HIKESHIQ53FT3 197 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CCDC144NLQ6NUI1 221 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 RBKSQ9H477 322 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 SMAD9O15198 467 aaKnown RBP7.77□□□□□ -1.17
COL6A5-202ENST00000312481 HBZP02008 142 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 BMP5P22003 454 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 PAX5Q02548 391 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 OR13H1Q8NG92 308 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 UBALD1Q8TB05 177 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 LRFN3Q9BTN0 628 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 C11orf94C9JXX5 98 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 KLF4O43474 513 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 TNFSF15O95150 251 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 IL2RAP01589 272 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CRISP2P16562 243 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CDX1P47902 265 aaPredicted RBP7.77□□□□□ -1.17
COL6A5-202ENST00000312481 HERVK_113P61574 105 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 OR2T6Q8NHC8 308 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CCDC74BQ96LY2 380 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 SLC26A1Q9H2B4 701 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 BOLA1Q9Y3E2 137 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 C7orf77A4D0Y5 90 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CCR2P41597 374 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 VN1R4Q7Z5H5 301 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 OR52B4Q8NGK2 314 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 OR5D18Q8NGL1 313 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 SP7Q8TDD2 431 aaPredicted RBP7.77□□□□□ -1.17
COL6A5-202ENST00000312481 CXXC4Q9H2H0 198 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 A0A1W2PPC1 479 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 A8MWL6 223 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 SEMA7AO75326 666 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 BTLAQ7Z6A9 289 aa7.77□□□□□ -1.17
COL6A5-202ENST00000312481 A0A1B0GTL3 188 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 CDC42EP2O14613 210 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 YY2O15391 372 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 SIAH2O43255 324 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 GABRG2P18507 467 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 MICBQ29980 383 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 OR2Y1Q8NGV0 311 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 J3QT63 122 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
COL6A5-202ENST00000312481 MPGP29372 298 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 MC5RP33032 325 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 ACAA2P42765 397 aaKnown RBP7.76□□□□□ -1.17
COL6A5-202ENST00000312481 LGALS4P56470 323 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM88Q6PEY1 159 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 SMIM8Q96KF7 97 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 VN1R1Q9GZP7 353 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 A6NIN4 97 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 PRRG2O14669 202 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 NPBWR2P48146 333 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 TESK1Q15569 626 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 LINC01555Q8NAE3 123 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 RXFP4Q8TDU9 374 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 TM2D1Q9BX74 207 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 RNF122Q9H9V4 155 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 COA4Q9NYJ1 87 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 CTLA4P16410 223 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 RGS7BPQ6MZT1 257 aaPredicted RBP7.76□□□□□ -1.17
COL6A5-202ENST00000312481 CLEC18BQ6UXF7 455 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 VPS25Q9BRG1 176 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 LTBP2Q14767 1821 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 C5orf49A4QMS7 147 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 PLPPR5Q32ZL2 321 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 C10orf128Q5T292 105 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 C1QTNF9BB2RNN3 333 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 FCN1O00602 326 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 SOD3P08294 240 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 SLC25A40Q8TBP6 338 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 C20orf141Q9NUB4 165 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 ATP23Q9Y6H3 246 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 TCAPO15273 167 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 PSG6Q00889 435 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 DEFB133Q30KQ1 61 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 PDPNQ86YL7 162 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 FBXL14Q8N1E6 418 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 C19orf67A6NJJ6 358 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 MASP2O00187 686 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 CDCP1Q9H5V8 836 aa7.76□□□□□ -1.17
COL6A5-202ENST00000312481 LIPCP11150 499 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 NAT1P18440 290 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 MVDP53602 400 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 SRYQ05066 204 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CALHM1Q8IU99 346 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms