RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CCBE1Q6UXH8 406 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 PRR18Q8N4B5 295 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 NKAIN3Q8N8D7 197 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 PPP1R35Q8TAP8 253 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 ELF5Q9UKW6 265 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 FAM96BQ9Y3D0 163 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 TRGV10A0A0A0MS01 117 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 TRDV1A0A1B0GX56 115 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM14DPA8MWL7 114 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 ODF3BA8MYP8 253 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 H3BUX3 64 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 CLPXO76031 633 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 GNG10P50151 68 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 C2orf76Q3KRA6 126 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 GLT8D1Q68CQ7 371 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 SVOPQ8N4V2 548 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 CHST4Q8NCG5 386 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 UQCC2Q9BRT2 126 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 LPAR5Q9H1C0 372 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 RCC2Q9P258 522 aaKnown RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 LOC100506127A0A0U1RQW1 187 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 MT-ND4P03905 459 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 MDKP21741 143 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-201ENST00000311943 KCTD21Q4G0X4 260 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 SYT6Q5T7P8 510 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-201ENST00000311943 ABHD12Q8N2K0 398 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 OR4P4Q8NGL7 312 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 FAM216AQ8WUB2 273 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 PHYHIPQ92561 330 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 CORO2AQ92828 525 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 CPNE2Q96FN4 548 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-201ENST00000311943 SSX3Q99909 188 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 YTHDF1Q9BYJ9 559 aaKnown RBP9.74□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 ZMAT3Q9HA38 289 aaKnown RBP9.74□□□□□ -0.85
SCFD1-201ENST00000311943 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 CALYQ9NYX4 217 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 SIGLEC9Q9Y336 463 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 V9GY05 133 aa9.74□□□□□ -0.85
SCFD1-201ENST00000311943 FAM90A8PA6NJQ4 464 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TRIM77I1YAP6 450 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 SLC17A2O00624 439 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 SLC31A2O15432 143 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 CD36P16671 472 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM50BP56557 158 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 RPS27AP62979 156 aaKnown RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 RBM39Q14498 530 aaKnown RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 NCR3LG1Q68D85 454 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ZNF626Q68DY1 528 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 C16orf87Q6PH81 154 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM219Q86XT9 240 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TSPAN14Q8NG11 270 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 GCDHQ92947 438 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 BARHL1Q9BZE3 327 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 FBLN5Q9UBX5 448 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 UBE2J1Q9Y385 318 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 SESN1Q9Y6P5 492 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 A0A0A6YYJ9 748 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 KBTBD11-OT1A0A1B0GTJ5 212 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 CHST1O43916 411 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 GPR137BO60478 399 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ZNF780AO75290 641 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 PAHP00439 452 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 SMIM18P0DKX4 95 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ARSBP15848 533 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 CHATP28329 748 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 GNMTQ14749 295 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 MPV17LQ2QL34 196 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 PLAC9Q5JTB6 97 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 HEPN1Q6WQI6 88 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ZNF497Q6ZNH5 498 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 Q6ZS46 218 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 OR11H6Q8NGC7 330 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 OR6M1Q8NGM8 313 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 OR1L1Q8NH94 360 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 FAM3DQ96BQ1 224 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 TMEM59Q9BXS4 323 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 HEXA-AS1Q9H8Q6 139 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 ETAA1Q9NY74 926 aa9.73□□□□□ -0.85
SCFD1-201ENST00000311943 C12orf77C9JDV5 145 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 AIPO00170 330 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 FBP1P09467 338 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 BLVRBP30043 206 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 SDC2P34741 201 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 VEGFCP49767 419 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 FAM189A2Q15884 450 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 RAB11BQ15907 218 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 CDH26Q8IXH8 852 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 OR10V1Q8NGI7 309 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 NAA50Q9GZZ1 169 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms