RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ALKBH6Q3KRA9 238 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 STPG3Q8N7X2 389 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 SBF1O95248 1867 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 COL6A6A6NMZ7 2263 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 TMEM210A6NLX4 147 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 SYNGR2O43760 224 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 CDS2O95674 445 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 LSM6P62312 80 aaKnown RBP13.72□□□□□ -0.21
HCFC1-201ENST00000310441 RFLNAQ6ZTI6 216 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 PITX3O75364 302 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 TWIST1Q15672 202 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 SP6Q3SY56 376 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 OR4D9Q8NGE8 314 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 SHANK1Q9Y566 2161 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 KCNE1BA0A087WTH5 132 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF83P51522 516 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-201ENST00000310441 CADM4Q8NFZ8 388 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 TRILQ7L0X0 811 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 OR2V2Q96R30 315 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 GABRA1P14867 456 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 WDR38Q5JTN6 314 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 GZMHP20718 246 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 TNXAQ16473 311 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 CASP8AP2Q9UKL3 1982 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 IFITM10A6NMD0 228 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 MPDU1O75352 247 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 SKP2Q13309 424 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 PSG5Q15238 335 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 SMIM14Q96QK8 99 aa13.72□□□□□ -0.21
HCFC1-201ENST00000310441 DIRC3C9JPN6 131 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PLP1P60201 277 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 SERF2P84101 59 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 COL19A1Q14993 1142 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PARM1Q6UWI2 310 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 WNT3P56703 355 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 RAB32Q13637 225 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF770Q6IQ21 691 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-201ENST00000310441 TBX15Q96SF7 602 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 IL19Q9UHD0 177 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 CTXND1A0A1B0GTU2 59 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 TMPRSS2O15393 492 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 LILRA3Q8N6C8 439 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PRO1933Q9H354 126 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PARP11Q9NR21 331 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 SERTM1A2A2V5 107 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 A8MWL6 223 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 HBZP02008 142 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 COMPP49747 757 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PCBP3P57721 371 aaKnown RBP13.71□□□□□ -0.21
HCFC1-201ENST00000310441 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 LIPGQ9Y5X9 500 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 MGPP08493 103 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 OR3A4PP47883 348 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 TNFSF10P50591 281 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 GUCA2AQ02747 115 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PABPC1L2AQ5JQF8 200 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-201ENST00000310441 CCL17Q92583 94 aa13.71□□□□□ -0.21
HCFC1-201ENST00000310441 PMCHL2Q9BQD1 86 aa13.71□□□□□ -0.22
HCFC1-201ENST00000310441 POM121BA6NF01 834 aa13.71□□□□□ -0.22
HCFC1-201ENST00000310441 RTP5Q14D33 572 aa13.71□□□□□ -0.22
HCFC1-201ENST00000310441 LPAR5Q9H1C0 372 aa13.71□□□□□ -0.22
HCFC1-201ENST00000310441 FCMRO60667 390 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 GHRHP01286 108 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 OR1L8Q8NGR8 309 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 RAB33BQ9H082 229 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 WDR13Q9H1Z4 485 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 DOK5Q9P104 306 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 UBE2V2Q15819 145 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 ACAA1P09110 424 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 RPL34P49207 117 aaKnown RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 ASCL3Q9NQ33 180 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 A0A1W2PS18 150 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 HOXC4P09017 264 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 NAT2P11245 290 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 MRPL30Q8TCC3 161 aaKnown RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 PAPPA-AS1Q5QFB9 102 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 BVESQ8NE79 360 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 OR4B1Q8NGF8 309 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 FLYWCH2Q96CP2 140 aaKnown RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 GHITMQ9H3K2 345 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 PAM16Q9Y3D7 125 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 OR4P4Q8NGL7 312 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 GAGE10A6NGK3 116 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 S1PR2O95136 353 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
HCFC1-201ENST00000310441 TSPAN32Q96QS1 320 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 ABCA7Q8IZY2 2146 aa13.7□□□□□ -0.22
HCFC1-201ENST00000310441 ANKRD20A5PA0PJZ0 165 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 WNT9BO14905 357 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CSN3P07498 182 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms