RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GSKIPQ9P0R6 139 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 ICE1Q9Y2F5 2266 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 TRGV8A0A0C4DH27 118 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 C16orf97H3BN30 126 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 I3L521 148 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 OR2H2O95918 312 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 AADACP22760 399 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 GLP1RP43220 463 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 RTN4IP1Q8WWV3 396 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 MOB3AQ96BX8 217 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 SPACA1Q9HBV2 294 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 OR5AC2Q9NZP5 309 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 OR14J1Q9UGF5 321 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 TUBD1Q9UJT1 453 aa18.99■□□□□ 0.63
PDLIM2-202ENST00000308354 RAB32Q13637 225 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 AANATQ16613 207 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 SP6Q3SY56 376 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 OR5T2Q8NGG2 359 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 SLC2A9Q9NRM0 540 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 TFF1P04155 84 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 NKX6-1P78426 367 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 WFDC8Q8IUA0 241 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 Q8IYB0 196 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 NAA60Q9H7X0 242 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 SPEF1Q9Y4P9 236 aa18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 SMG1Q96Q15 3661 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-202ENST00000308354 TRAV39A0A0B4J263 110 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 BET1O15155 118 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 CD40P25942 277 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 ID4P47928 161 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 IL15RAQ13261 267 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 FAM74A1Q5RGS3 127 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 OR11L1Q8NGX0 322 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 MRPL30Q8TCC3 161 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 PIK3IP1Q96FE7 263 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 NBEAQ8NFP9 2946 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 hCG_1807616A0A1W2PRN6 198 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 F5H0A9 414 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 ATXN7O15265 892 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 TPD52L2O43399 206 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 SLC34A2O95436 690 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 OR5AC1P0C628 307 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 ZNF250P15622 560 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 RCC1P18754 421 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 GLRXP35754 106 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 HERV-K104P61576 105 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 PAN3Q58A45 887 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 PRSS54Q6PEW0 395 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 WDR82Q6UXN9 313 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 C1orf174Q8IYL3 243 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 TMEM171Q8WVE6 324 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 RND1Q92730 232 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 ELOVL5Q9NYP7 299 aa18.97■□□□□ 0.63
PDLIM2-202ENST00000308354 ZSCAN5BA6NJL1 495 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 SLC33A1O00400 549 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 PPYP01298 95 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 S100A10P60903 97 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 IAH1Q2TAA2 248 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 Q6ZS49 121 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 MRPL24Q96A35 216 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 ARPC5LQ9BPX5 153 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 JKAMPQ9P055 326 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 NBASA2RRP1 2371 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 TEX46H3BTG2 121 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 KLF3P57682 345 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 KLRB1Q12918 225 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 HERPUD1Q15011 391 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 C3orf36Q3SXR2 165 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 SPRNQ5BIV9 151 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 SLC38A6Q8IZM9 456 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 RHOFQ9HBH0 211 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 KCNIP3Q9Y2W7 256 aa18.96■□□□□ 0.63
PDLIM2-202ENST00000308354 PLCE1Q9P212 2302 aa18.96■□□□□ 0.62
PDLIM2-202ENST00000308354 MSGN1A6NI15 193 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 TMEM187Q14656 261 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 ZNF146Q15072 292 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 FOXRED2Q8IWF2 684 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 OR1S1Q8NH92 325 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 PLPPR1Q8TBJ4 325 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 REG4Q9BYZ8 158 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 IFT22Q9H7X7 185 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 SDHAF2Q9NX18 166 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 KALRNO60229 2985 aa18.95■□□□□ 0.62
PDLIM2-202ENST00000308354 IGHV3-13P01766 116 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 LYL1P12980 280 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 UCP3P55916 312 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 GGNBP1Q5YKI7 109 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 PDZD9Q8IXQ8 264 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 GALNT14Q96FL9 552 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 MEMO1Q9Y316 297 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 POLEQ07864 2286 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 THBDP07204 575 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 SPERTQ8NA61 448 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 RBPMSQ93062 196 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 RSRP1Q9BUV0 290 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 MRPL37Q9BZE1 423 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 TLNRD1Q9H1K6 362 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 HES4Q9HCC6 221 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 ATP23Q9Y6H3 246 aa18.94■□□□□ 0.62
PDLIM2-202ENST00000308354 IGKV1-6A0A0C4DH72 117 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms