RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 NUFIP2Q7Z417 695 aaKnown RBP11.13□□□□□ -0.63
USP38-201ENST00000307017 C9orf62Q8N4C0 152 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 SLC7A10Q9NS82 523 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 TINAGQ9UJW2 476 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ANKRD20A5PA0PJZ0 165 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 DHRS3O75911 302 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 AREGP15514 252 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 PGLYRP4Q96LB8 373 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 OCIAD1Q9NX40 245 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 C7orf77A4D0Y5 90 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 KLF7O75840 302 aaPredicted RBP11.13□□□□□ -0.63
USP38-201ENST00000307017 ACP1P24666 158 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ZAR1Q86SH2 424 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 S4R3C0 116 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 CYC1P08574 325 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ITGB4P16144 1822 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 A0A1B0GV90 55 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ZNF324O75467 553 aaPredicted RBP11.13□□□□□ -0.63
USP38-201ENST00000307017 TRGC2P03986 189 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 KLRB1Q12918 225 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 BSXQ3C1V8 233 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 MESTQ5EB52 335 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.13□□□□□ -0.63
USP38-201ENST00000307017 CENPVL1A0A0U1RR11 272 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 RPS23P62266 143 aaKnown RBP11.13□□□□□ -0.63
USP38-201ENST00000307017 GNG3P63215 75 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 OR5AC2Q9NZP5 309 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 KIAA1217Q5T5P2 1943 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 INHBBP09529 407 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 COL9A1P20849 921 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 OR10G8Q8NGN5 311 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 APOBEC3DQ96AK3 386 aaPredicted RBP11.12□□□□□ -0.63
USP38-201ENST00000307017 VSTM2LQ96N03 204 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 SH3BGRL3Q9H299 93 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 PLPP2O43688 288 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 EMP1P54849 157 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
USP38-201ENST00000307017 CD226Q15762 336 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 KLK13Q9UKR3 277 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 KLHDC2Q9Y2U9 406 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 SMPD2O60906 423 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
USP38-201ENST00000307017 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 TMEM56Q96MV1 263 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 HSPB9Q9BQS6 159 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 SH2D2AQ9NP31 389 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 MTFP1Q9UDX5 166 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 PCGF1Q9BSM1 259 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
USP38-201ENST00000307017 TRAV38-1A0A0B4J264 116 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 GCGP01275 180 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 GABRG2P18507 467 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 PMELP40967 661 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 TPBGQ13641 420 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 ZNF628Q5EBL2 1059 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 CARFQ8N187 725 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
USP38-201ENST00000307017 MRPL13Q9BYD1 178 aaKnown RBP11.12□□□□□ -0.63
USP38-201ENST00000307017 FGF2P09038 288 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 CACNG7P62955 275 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 PNLIPRP3Q17RR3 467 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 HFEQ30201 348 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 TM4SF20Q53R12 229 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 FAM74A7A6NL05 159 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 SIAH2O43255 324 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 EWSR1Q01844 656 aaKnown RBP eCLIP11.11□□□□□ -0.63
USP38-201ENST00000307017 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 ABHD14BQ96IU4 210 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 CLEC1BQ9P126 229 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 MYO7AQ13402 2215 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 FFAR1O14842 300 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 EML2O95834 649 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 HYAL1Q12794 435 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 KLK8O60259 260 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 PRSS23O95084 383 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 CXCL2P19875 107 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 TM4SF4P48230 202 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms