RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GALR1P47211 349 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 TPPP2P59282 170 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 ZBTB34Q8NCN2 500 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 DTD1Q8TEA8 209 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 MRPL24Q96A35 216 aaKnown RBP13.93□□□□□ -0.18
USP42-201ENST00000306177 HSD17B10Q99714 261 aaKnown RBP13.93□□□□□ -0.18
USP42-201ENST00000306177 ARL2-SNX15V9GYD0 113 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 ZFC3H1O60293 1989 aaKnown RBP13.93□□□□□ -0.18
USP42-201ENST00000306177 MYOFQ9NZM1 2061 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 HSBP1O75506 76 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 FSTP19883 344 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 RFLNBQ8N5W9 214 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 DNASE2BQ8WZ79 361 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 RNF2Q99496 336 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 TREM2Q9NZC2 230 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 SUMO1P63165 101 aaKnown RBP13.92□□□□□ -0.18
USP42-201ENST00000306177 OR11H7Q8NGC8 314 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 SAP25Q8TEE9 199 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
USP42-201ENST00000306177 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 RNF122Q9H9V4 155 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 MRPS18BQ9Y676 258 aaKnown RBP13.92□□□□□ -0.18
USP42-201ENST00000306177 WDR90Q96KV7 1748 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 CDS2O95674 445 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 GABRA6Q16445 453 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 MOGAT2Q3SYC2 334 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 LYPD8Q6UX82 237 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 HSD17B13Q7Z5P4 300 aaPredicted RBP13.92□□□□□ -0.18
USP42-201ENST00000306177 OR4A8P0C604 315 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 SMIM10L1P0DMW3 83 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 SMIM10Q96HG1 83 aa13.92□□□□□ -0.18
USP42-201ENST00000306177 FGF8P55075 233 aaPredicted RBP13.91□□□□□ -0.18
USP42-201ENST00000306177 C1orf174Q8IYL3 243 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 PILRBQ9UKJ0 227 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 NQO2P16083 231 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 ZNF66Q6ZN08 573 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 OR2J1Q9GZK6 312 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 LPAR3Q9UBY5 353 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 YTHDF2Q9Y5A9 579 aaKnown RBP13.91□□□□□ -0.18
USP42-201ENST00000306177 RBM11P57052 281 aaKnown RBP13.91□□□□□ -0.18
USP42-201ENST00000306177 PSG4Q00888 419 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 SSX8Q7RTT4 187 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 ADAD2Q8NCV1 583 aaKnown RBP13.91□□□□□ -0.18
USP42-201ENST00000306177 BLNKQ8WV28 456 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 DOK5Q9P104 306 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 OR5H1A6NKK0 313 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 PGA4P0DJD7 388 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
USP42-201ENST00000306177 C9orf62Q8N4C0 152 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 GRAMD2BQ96HH9 432 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 MSL2Q9HCI7 577 aa13.91□□□□□ -0.18
USP42-201ENST00000306177 ZNF205O95201 554 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 BRS3P32247 399 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 KRTDAPP60985 99 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 STPG1Q5TH74 334 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 TMEM251Q8N6I4 163 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 ADIPOR1Q96A54 375 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 LOC285556D6RIA3 1793 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 CRYBA1P05813 215 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 CLEC9AQ6UXN8 241 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 ORM2P19652 201 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 ZNF154Q13106 437 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 SLC23A3Q6PIS1 610 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 FA2HQ7L5A8 372 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 DYRK2Q92630 601 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 NOL4LQ96MY1 436 aaPredicted RBP13.9□□□□□ -0.18
USP42-201ENST00000306177 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 TMEM167BQ9NRX6 74 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 KLK13Q9UKR3 277 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
USP42-201ENST00000306177 FCER1GP30273 86 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 LYZP61626 148 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 ROM1Q03395 351 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 TGIF2LYQ8IUE0 185 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 NHLRC2Q8NBF2 726 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 SCMH1Q96GD3 660 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 SLC7A10Q9NS82 523 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 PIPOXQ9P0Z9 390 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 NAT8BQ9UHF3 227 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 CKAP5Q14008 2032 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 CTSBP07858 339 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 C1orf185Q5T7R7 199 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 LYZL2Q7Z4W2 148 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 OR52L2PQ8NGH6 319 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 MRGPRFQ96AM1 343 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 C12orf57Q99622 126 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 PPP1R3EQ9H7J1 279 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 PRNDQ9UKY0 176 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 SVILO95425 2214 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 TRBV5-5A0A0J9YX44 114 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 A0A1B0GU03 582 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
USP42-201ENST00000306177 SULT1A1P50225 295 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 FBLIM1Q8WUP2 373 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 TMEM37Q8WXS4 190 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 WFDC6Q9BQY6 131 aa13.89□□□□□ -0.19
USP42-201ENST00000306177 TECRQ9NZ01 308 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms