RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
TRIM56-201ENST00000306085 SOSTQ9BQB4 213 aa11.92□□□□□ -0.5
TRIM56-201ENST00000306085 HDHD3Q9BSH5 251 aaPredicted RBP11.92□□□□□ -0.5
TRIM56-201ENST00000306085 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
TRIM56-201ENST00000306085 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 KISS1Q15726 138 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 UBE2V2Q15819 145 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 C16orf52Q8NHV5 167 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 NDUFB6O95139 128 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 FTH1P19P0C7X4 201 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 ST6GAL1P15907 406 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 DYSFO75923 2080 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
TRIM56-201ENST00000306085 NDUFS8O00217 210 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 IP6K3Q96PC2 410 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 A0A0B4J293 547 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 UBALD2Q8IYN6 164 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 A0A1B0GUL6 1792 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 SBK3P0C264 359 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 KCNMB1Q16558 191 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 RNF186Q9NXI6 227 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 WNT16Q9UBV4 365 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 MKRN2OSH3BPM6 223 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 H3BQ15 152 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 MMP9P14780 707 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 PHLDA3Q9Y5J5 127 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 TNFSF15O95150 251 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 TNFAIP6P98066 277 aaPredicted RBP11.91□□□□□ -0.5
TRIM56-201ENST00000306085 PELI3Q8N2H9 469 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 R3HDM4Q96D70 268 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 CYB5R2Q6BCY4 276 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 OR1K1Q8NGR3 316 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 TAF1P21675 1872 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 PTPRQQ9UMZ3 2332 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
TRIM56-201ENST00000306085 A0A1W2PR48 441 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
TRIM56-201ENST00000306085 DHRS4L2Q6PKH6 230 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 TEX101Q9BY14 249 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 DPH3P1Q9H4G8 78 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 OR13H1Q8NG92 308 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 FAM219AQ8IW50 185 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 HOXC4P09017 264 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-201ENST00000306085 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
TRIM56-201ENST00000306085 AKIP1Q9NQ31 210 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 C19orf53Q9UNZ5 99 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-201ENST00000306085 NXPH1P58417 271 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-201ENST00000306085 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 PPM1DO15297 605 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 UQCR10Q9UDW1 63 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 KCNMB2Q9Y691 235 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 TRAV21A0A0B4J279 112 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 SFT2D2O95562 160 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 HIST1H1DP16402 221 aaKnown RBP11.9□□□□□ -0.5
TRIM56-201ENST00000306085 TFPI2P48307 235 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 PRR13Q9NZ81 148 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
TRIM56-201ENST00000306085 HMX2A2RU54 273 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 POLR2GP62487 172 aaKnown RBP eCLIP11.9□□□□□ -0.51
TRIM56-201ENST00000306085 BTG2P78543 158 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 MGAT2Q10469 447 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 LRRC29Q8WV35 223 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 LRRC3BQ96PB8 259 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 FCMRO60667 390 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 NPPBP16860 134 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 C1orf220Q5T0J3 134 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 PDXPQ96GD0 296 aa11.9□□□□□ -0.51
TRIM56-201ENST00000306085 PSMB11A5LHX3 300 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 AGERQ15109 404 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 OR4D9Q8NGE8 314 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
TRIM56-201ENST00000306085 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 TMEM189-UBE2V1I3L0A0 370 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 TGFAP01135 160 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 ZNF273Q14593 569 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 NEU1Q99519 415 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 RIMBP3CA6NJZ7 1639 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 RIMBP3BA6NNM3 1639 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 RIMBP3Q9UFD9 1639 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 FAM74A7A6NL05 159 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 SAP30LQ9HAJ7 183 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 PAGE4O60829 102 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 Q6ZSR9 355 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 MS4A6EQ96DS6 147 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 YIPF6Q96EC8 236 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms