RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MT-ND4P03905 459 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 ARFRP1Q13795 201 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 CCDC107Q8WV48 283 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 C12orf4Q9NQ89 552 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 V9GYH0 126 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 WNK2Q9Y3S1 2297 aa22.41■■□□□ 1.18
HDAC3-201ENST00000305264 CA11O75493 328 aa22.4■■□□□ 1.18
HDAC3-201ENST00000305264 MELTFP08582 738 aa22.4■■□□□ 1.18
HDAC3-201ENST00000305264 CD3GP09693 182 aa22.4■■□□□ 1.18
HDAC3-201ENST00000305264 FAM185AQ8N0U4 392 aa22.4■■□□□ 1.18
HDAC3-201ENST00000305264 ABHD1Q96SE0 405 aa22.4■■□□□ 1.18
HDAC3-201ENST00000305264 TRBV23-1A0A0A0MS06 115 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 SSX5O60225 188 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 GNG2P59768 71 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 GUCA2AQ02747 115 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 PAX2Q02962 417 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 IL18Q14116 193 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 ZNF273Q14593 569 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 PNLIPRP3Q17RR3 467 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 OR13A1Q8NGR1 328 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 DACT3Q96B18 629 aaPredicted RBP22.39■■□□□ 1.18
HDAC3-201ENST00000305264 SOSTQ9BQB4 213 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 CHMP1AQ9HD42 196 aaPredicted RBP22.39■■□□□ 1.18
HDAC3-201ENST00000305264 MMP26Q9NRE1 261 aa22.39■■□□□ 1.18
HDAC3-201ENST00000305264 MEIOCA2RUB1 952 aa22.39■■□□□ 1.17
HDAC3-201ENST00000305264 FUOMA2VDF0 154 aa22.39■■□□□ 1.17
HDAC3-201ENST00000305264 ECDO95905 644 aaPredicted RBP22.39■■□□□ 1.17
HDAC3-201ENST00000305264 IGHV4-31P0DP07 118 aa22.39■■□□□ 1.17
HDAC3-201ENST00000305264 CD276Q5ZPR3 534 aa22.39■■□□□ 1.17
HDAC3-201ENST00000305264 C8orf46Q8TAG6 207 aa22.39■■□□□ 1.17
HDAC3-201ENST00000305264 POLR3KQ9Y2Y1 108 aaPredicted RBP22.39■■□□□ 1.17
HDAC3-201ENST00000305264 A0A1W2PQ09 198 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 FABP12A6NFH5 140 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 B4DSR2 109 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 MSMBP08118 114 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 GLP1RP43220 463 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 TMEM200BQ69YZ2 307 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 FAM131AQ6UXB0 335 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 LY6G5BQ8NDX9 201 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 MSI2Q96DH6 328 aaKnown RBP22.38■■□□□ 1.17
HDAC3-201ENST00000305264 COX4I2Q96KJ9 171 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 MRPS15P82914 257 aaKnown RBP22.38■■□□□ 1.17
HDAC3-201ENST00000305264 MEF2CQ06413 473 aaPredicted RBP22.38■■□□□ 1.17
HDAC3-201ENST00000305264 C11orf91Q3C1V1 193 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 BAIAP2L2Q6UXY1 529 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 MRGPRDQ8TDS7 321 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 TRAPPC2LQ9UL33 140 aa22.38■■□□□ 1.17
HDAC3-201ENST00000305264 ABCA1O95477 2261 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 SVEP1Q4LDE5 3571 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 PPIAL4CA0A0B4J2A2 164 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 hADV38S2A0JD32 116 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 PPIAL4GP0DN37 164 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 RCC1P18754 421 aaPredicted RBP22.37■■□□□ 1.17
HDAC3-201ENST00000305264 SPANXN2Q5MJ10 180 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 TRAPPC6BQ86SZ2 158 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 LINC01356Q8N9X3 169 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF230Q9UIE0 474 aaPredicted RBP22.37■■□□□ 1.17
HDAC3-201ENST00000305264 LINC00312Q9Y6C7 94 aa22.37■■□□□ 1.17
HDAC3-201ENST00000305264 IGHV2-70DA0A0C4DH43 119 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 FCGR3AP08637 254 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 ETV6P41212 452 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 SPNS3Q6ZMD2 512 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 SETD6Q8TBK2 473 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 MAFIPQ8WZ33 124 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 NCOR1P1Q9H4R4 102 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 MEIS3P1A6NDR6 274 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 CCL3L1P16619 93 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 PRSS3P35030 304 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 RNASE12Q5GAN4 147 aaKnown RBP22.36■■□□□ 1.17
HDAC3-201ENST00000305264 PYHIN1Q6K0P9 492 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 RIMS4Q9H426 269 aaPredicted RBP22.36■■□□□ 1.17
HDAC3-201ENST00000305264 OR6C3Q9NZP0 311 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 LPAR3Q9UBY5 353 aa22.36■■□□□ 1.17
HDAC3-201ENST00000305264 TRGV10A0A0A0MS01 117 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 TRBV6-6A0A0A6YYG2 114 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 ENSAO43768 121 aaKnown RBP22.35■■□□□ 1.17
HDAC3-201ENST00000305264 TPPPO94811 219 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 PITPNAQ00169 270 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF79Q15937 498 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF880Q6PDB4 577 aa22.35■■□□□ 1.17
HDAC3-201ENST00000305264 MBNL3Q9NUK0 354 aaKnown RBP22.35■■□□□ 1.17
HDAC3-201ENST00000305264 LINC00299Q6ZSB3 139 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 C5orf24Q7Z6I8 188 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 CSPG4Q6UVK1 2322 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 LIPFP07098 398 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 SSTR5P35346 364 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 GZMKP49863 264 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 MFSD4AQ8N468 514 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 CORO2AQ92828 525 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 Q9N2K0 584 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 AKIP1Q9NQ31 210 aa22.34■■□□□ 1.17
HDAC3-201ENST00000305264 TLN2Q9Y4G6 2542 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF16P17020 682 aaPredicted RBP22.33■■□□□ 1.17
HDAC3-201ENST00000305264 GVQW1Q8N7I0 195 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF565Q8N9K5 539 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 UBALD1Q8TB05 177 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 GPX8Q8TED1 209 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 ZNF714Q96N38 554 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 ONECUT1Q9UBC0 465 aa22.33■■□□□ 1.17
HDAC3-201ENST00000305264 UBE2J1Q9Y385 318 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms