RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 THYN1Q9P016 225 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 A0A1W2PQF6 199 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 CCKARP32238 428 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.45
PRKCB-201ENST00000303531 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 A0A1B0GTQ1 180 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 KIR3DL2P43630 455 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 PDPNQ86YL7 162 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 PRSS27Q9BQR3 290 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
PRKCB-201ENST00000303531 PRSS50Q9UI38 385 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 MRPS18BQ9Y676 258 aaKnown RBP12.21□□□□□ -0.45
PRKCB-201ENST00000303531 TRAV39A0A0B4J263 110 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 BMI1P35226 326 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 DLK1P80370 383 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 VSTM2AQ8TAG5 236 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.45
PRKCB-201ENST00000303531 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.46
PRKCB-201ENST00000303531 TCTEX1D1Q8N7M0 179 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.46
PRKCB-201ENST00000303531 J3QT63 122 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 CEACAM3P40198 252 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 NAGKQ9UJ70 344 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 OR2W1Q9Y3N9 320 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 SVILO95425 2214 aa12.21□□□□□ -0.46
PRKCB-201ENST00000303531 RPL29P47914 159 aaKnown RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 SULT1A1P50225 295 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 BMPR1BO00238 502 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 RAB33BQ9H082 229 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 LINC00862A6NCI5 91 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 A0A1W2PRD5 423 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 A0A1W2PRF3 423 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 A0A1W2PRM7 423 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 ZFP36L2P47974 494 aaKnown RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 TCL1AP56279 114 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 PSG5Q15238 335 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 OR4P4Q8NGL7 312 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 COL4A1P02462 1669 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 C7orf77A4D0Y5 90 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 G6PCP35575 357 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 FAM186AA6NE01 2351 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 RPL13AP40429 203 aaKnown RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 SLC23A3Q6PIS1 610 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 HOGA1Q86XE5 327 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 OR10G8Q8NGN5 311 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 RNF2Q99496 336 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-201ENST00000303531 F5H697 171 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 CDS2O95674 445 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 MESP2Q0VG99 397 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 RPL36A-HNRNPH2H7BZ11 118 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 TTRP02766 147 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 FOXL2P58012 376 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 RGP1Q92546 391 aaPredicted RBP12.19□□□□□ -0.46
PRKCB-201ENST00000303531 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
PRKCB-201ENST00000303531 OR5A2Q8NGI9 324 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 TMEM50BP56557 158 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 ASAH2BP0C7U1 165 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 PSG2P11465 335 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 CRISP2P16562 243 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 GZMHP20718 246 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 TRIP12Q14669 1992 aaPredicted RBP12.19□□□□□ -0.46
PRKCB-201ENST00000303531 IGHV4-34P06331 123 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 OR1K1Q8NGR3 316 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 RCC2Q9P258 522 aaKnown RBP12.19□□□□□ -0.46
PRKCB-201ENST00000303531 CBY1Q9Y3M2 126 aa12.19□□□□□ -0.46
PRKCB-201ENST00000303531 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
PRKCB-201ENST00000303531 C21orf140B9A014 251 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 CD3EP07766 207 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 SCGB1C2P0DMR2 95 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 IL11P20809 199 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 OR4A4PQ8NGN8 299 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 TNFSF18Q9UNG2 199 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 OR52L2PQ8NGH6 319 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 SNX22Q96L94 193 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 OR4A8P0C604 315 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 LIMS1P48059 325 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF345Q14585 488 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 PLPPR5Q32ZL2 321 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 RAB1CQ92928 201 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 PARP11Q9NR21 331 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 B4DEV8 164 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 KCNAB3O43448 404 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 WDR54Q9H977 334 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms