RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF816Q0VGE8 651 aaPredicted RBP12.21□□□□□ -0.46
SDC2-201ENST00000302190 ZP4Q12836 540 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 MPV17LQ2QL34 196 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 VAX1Q5SQQ9 334 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 PHYHD1Q5SRE7 291 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.46
SDC2-201ENST00000302190 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 RFNGQ9Y644 331 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 MFNGO00587 321 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 GPR137BO60478 399 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 YIF1AO95070 293 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 PRDX4Q13162 271 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 RAB35Q15286 201 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 WDR74Q6RFH5 385 aaPredicted RBP12.2□□□□□ -0.46
SDC2-201ENST00000302190 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 RTBDNQ9BSG5 229 aaPredicted RBP12.2□□□□□ -0.46
SDC2-201ENST00000302190 SLC2A8Q9NY64 477 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 DNAJB11Q9UBS4 358 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 FCGR3AP08637 254 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 ECI1P42126 302 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 DYNLT3P51808 116 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 TGIF2LXQ8IUE1 241 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 ZDHHC23Q8IYP9 409 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 UBAC2Q8NBM4 344 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 RARRES2Q99969 163 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 SCTP09683 121 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 GABRA4P48169 554 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 FABP6P51161 128 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 PSG4Q00888 419 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 LIAT1Q6ZQX7 453 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 LHX4Q969G2 390 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
SDC2-201ENST00000302190 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 A0A087WZY1 265 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 M0R296 226 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 BCL3P20749 454 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 SULT1A1P50225 295 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 IGFBP7Q16270 282 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 UCK1Q9HA47 277 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 TIMM8BQ9Y5J9 83 aaPredicted RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 ZNF292O60281 2723 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 KIR2DS1A0A191URI9 304 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 KIR2DS4P43632 304 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 KIR2DS1Q14954 304 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 COLCA2A8K830 154 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 ATXN7O15265 892 aaPredicted RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 IFNA1P01562 189 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 HMGN3Q15651 99 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
SDC2-201ENST00000302190 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
SDC2-201ENST00000302190 NCOA6Q14686 2063 aaPredicted RBP12.18□□□□□ -0.46
SDC2-201ENST00000302190 MPPED1O15442 326 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 IGLV3-19P01714 112 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 LIFP15018 202 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 RAB5AP20339 215 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 RAB4BP61018 213 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 OR4A4PQ8NGN8 299 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 BSCL2Q96G97 398 aaPredicted RBP12.18□□□□□ -0.46
SDC2-201ENST00000302190 GCM1Q9NP62 436 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 ZNF107Q9UII5 783 aaPredicted RBP12.18□□□□□ -0.46
SDC2-201ENST00000302190 SH3BGRL2Q9UJC5 107 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 LOXL2Q9Y4K0 774 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 DMXL2Q8TDJ6 3036 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 UBE2L5PA0A1B0GUS4 154 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 SERPINA7P05543 415 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 RAC3P60763 192 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 SRPXP78539 464 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
SDC2-201ENST00000302190 SRXN1Q9BYN0 137 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 RCC2Q9P258 522 aaKnown RBP12.18□□□□□ -0.46
SDC2-201ENST00000302190 RFPL3SP0C7P2 107 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 EDDM3BP56851 147 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 UBE2G2P60604 165 aa12.18□□□□□ -0.46
SDC2-201ENST00000302190 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
SDC2-201ENST00000302190 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
SDC2-201ENST00000302190 PHOX2AO14813 284 aa12.17□□□□□ -0.46
SDC2-201ENST00000302190 CYTIPO60759 359 aa12.17□□□□□ -0.46
SDC2-201ENST00000302190 IFNA10P01566 189 aa12.17□□□□□ -0.46
SDC2-201ENST00000302190 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
SDC2-201ENST00000302190 FAM166AQ6J272 317 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms