RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 OR2AE1Q8NHA4 323 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 CTDSP1Q9GZU7 261 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 FBRSQ9HAH7 460 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 UBE2J1Q9Y385 318 aaPredicted RBP9.38□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF407Q9C0G0 2248 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 ARHGAP21Q5T5U3 1957 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 UNC13CQ8NB66 2214 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 MARCH11A6NNE9 402 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 IGHV4-34P06331 123 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 THEGLP0DJG4 465 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 PLA2G5P39877 138 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 PDLIM4P50479 330 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 NUBP1P53384 320 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 GNB2P62879 340 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 ID3Q02535 119 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 TLE1Q04724 770 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 SPIN2AQ99865 258 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 SPIN2BQ9BPZ2 258 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 VAX2Q9UIW0 290 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 RNF115Q9Y4L5 304 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 PIAS3Q9Y6X2 628 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 FGF5P12034 268 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 MRPS34P82930 218 aaKnown RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 ENDOGQ14249 297 aaKnown RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 RTP5Q14D33 572 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 OR51G1Q8NGK1 321 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 R3HDM4Q96D70 268 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 HS3ST3A1Q9Y663 406 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 MBP02144 154 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 SRPXP78539 464 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 C1orf189Q5VU69 101 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 Q6ZSR3 168 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 RBKSQ9H477 322 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 SLC7A10Q9NS82 523 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 A6NNC1 897 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 M0R135 149 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 M0R143 59 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 RAB4AP20338 218 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 CTHP32929 405 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 IL24Q13007 206 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 NCR3LG1Q68D85 454 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 MRPL41Q8IXM3 137 aaKnown RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 OR2V1Q8NHB1 315 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM170AQ8WVE7 144 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM37Q8WXS4 190 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF799Q96GE5 643 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 PCGF1Q9BSM1 259 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 TAAR3PQ9P1P4 343 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
ZNF558-201ENST00000301475 POLR3KQ9Y2Y1 108 aaPredicted RBP9.37□□□□□ -0.91
ZNF558-201ENST00000301475 KIR2DL5BA0A0G2JN68 375 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 KIR2DL5BA0A0G2JPC4 375 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 CLEC18AA5D8T8 446 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 B4E171 279 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 NPSP0C0P6 89 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
ZNF558-201ENST00000301475 TSPAN7P41732 249 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 SUMO3P55854 103 aaPredicted RBP9.36□□□□□ -0.91
ZNF558-201ENST00000301475 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 BATF2Q8N1L9 274 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 CLEC18CQ8NCF0 446 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF845Q96IR2 970 aaPredicted RBP9.36□□□□□ -0.91
ZNF558-201ENST00000301475 ABHD14BQ96IU4 210 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 SMIM7Q9BQ49 75 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM208Q9BTX3 173 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 Q9N2K0 584 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 FBLP22087 321 aaKnown RBP9.36□□□□□ -0.91
ZNF558-201ENST00000301475 NPBWR2P48146 333 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 SLC25A24Q6NUK1 477 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 GAPTQ8N292 157 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 ACY3Q96HD9 319 aa9.36□□□□□ -0.91
ZNF558-201ENST00000301475 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
ZNF558-201ENST00000301475 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM210A6NLX4 147 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 PPP5D1E7EU14 171 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 MSR1P21757 451 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 GALR1P47211 349 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 FASLGP48023 281 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 IDH3GP51553 393 aaPredicted RBP9.35□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF41P51814 821 aaPredicted RBP9.35□□□□□ -0.91
ZNF558-201ENST00000301475 CLDN17P56750 224 aa9.35□□□□□ -0.91
ZNF558-201ENST00000301475 BTNL3Q6UXE8 466 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms