RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SYNGR1O43759 233 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 IGKV1-13P0DP09 117 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 OMGP23515 440 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 OR1C1Q15619 314 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 FAM173AQ9BQD7 235 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 FAM24AA6NFZ4 105 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 RPL36A-HNRNPH2H7BZ11 118 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 TNFSF12O43508 249 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 GPR137BO60478 399 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 TSPAN15O95858 294 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 OR2B8PP59922 312 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 CLINT1Q14677 625 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF124Q15973 351 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 TBC1D26Q86UD7 250 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 TMEM45BQ96B21 275 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 FAM212BQ9NTI7 297 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-204ENST00000300862 UBE2J1Q9Y385 318 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-204ENST00000300862 MRPS18CQ9Y3D5 142 aaKnown RBP11.06□□□□□ -0.64
HIF3A-204ENST00000300862 IGKV3D-15A0A087WSY6 115 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 M0R036 132 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 HSD17B6O14756 317 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 PRH1P02810 166 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 SNCAP37840 140 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 RAB1AP62820 205 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 HMGN3Q15651 99 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF818PQ6ZRF7 136 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 GAPTQ8N292 157 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 TTTY12Q9BZ98 90 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 SPACA1Q9HBV2 294 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 HS3ST1O14792 307 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 SYNGR4O95473 234 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 ARG1P05089 322 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 FBP1P09467 338 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 UCP3P55916 312 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 NUFIP2Q7Z417 695 aaKnown RBP11.05□□□□□ -0.64
HIF3A-204ENST00000300862 DPPA2Q7Z7J5 298 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 ZDHHC23Q8IYP9 409 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 C17orf78Q8N4C9 275 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 FAM24BQ8N5W8 94 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 TMEM251Q8N6I4 163 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 STRADBQ9C0K7 418 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 Q9N2K0 584 aa11.05□□□□□ -0.64
HIF3A-204ENST00000300862 BDP1A6H8Y1 2624 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 ESPL1Q14674 2120 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 BORCS7-ASMTA0A0B4J1R7 106 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 A0A1W2PPE2 198 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 TK1P04183 234 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 MPLP40238 635 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 EIF2S3P41091 472 aaKnown RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 P2RY1P47900 373 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 CAMLGP49069 296 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 PLGLB1Q02325 96 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 GUK1Q16774 197 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 CXorf66Q5JRM2 361 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 C20orf204Q6ZNR8 217 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 OR4D5Q8NGN0 318 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 RDH5Q92781 318 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 DSPP15924 2871 aaKnown RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 IGHV3-64DA0A0J9YX35 117 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 AP4M1O00189 453 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 GATCO43716 136 aaKnown RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 DANCRP0C864 163 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 SULT1A1P50225 295 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 FGF12P61328 243 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 CEACAM21Q3KPI0 293 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 HIKESHIQ53FT3 197 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 SPATA46Q5T0L3 261 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 ADAM5Q6NVV9 412 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 TMEM182Q6ZP80 229 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF695Q8IW36 515 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 APH1AQ96BI3 265 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 TECTBQ96PL2 329 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 EIF5A2Q9GZV4 153 aaKnown RBP11.04□□□□□ -0.64
HIF3A-204ENST00000300862 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 CCL28Q9NRJ3 127 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 B4GALT7Q9UBV7 327 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 TMED3Q9Y3Q3 217 aa11.04□□□□□ -0.64
HIF3A-204ENST00000300862 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-204ENST00000300862 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 LNP1A1A4G5 178 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 ADAM20O43506 726 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 SSSCA1O60232 199 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 UCP2P55851 309 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 EWSR1Q01844 656 aaKnown RBP eCLIP11.03□□□□□ -0.64
HIF3A-204ENST00000300862 GNMTQ14749 295 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 DCAF10Q5QP82 559 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 TCTEX1D2Q8WW35 142 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms