RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GEMIN2O14893 280 aaKnown RBP17.49■□□□□ 0.39
SMCO4-201ENST00000298966 RHBDL1O75783 438 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 NXPH2O95156 264 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 PRKACAP17612 351 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 GATA3P23771 443 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 SLC6A1P30531 599 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 MRPS15P82914 257 aaKnown RBP17.49■□□□□ 0.39
SMCO4-201ENST00000298966 GUCA2AQ02747 115 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 ZNF146Q15072 292 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 SMIM21Q3B7S5 101 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 PIGYQ3MUY2 71 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 PLAC9Q5JTB6 97 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 AVPI1Q5T686 147 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 OR11L1Q8NGX0 322 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 RCC2Q9P258 522 aaKnown RBP17.49■□□□□ 0.39
SMCO4-201ENST00000298966 NOTCH1P46531 2555 aa17.49■□□□□ 0.39
SMCO4-201ENST00000298966 FAM240BA0A1B0GVZ2 78 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 OR7C1O76099 320 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-201ENST00000298966 GNB3P16520 340 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 TBPP20226 339 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 ARFRP1Q13795 201 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 RBM39Q14498 530 aaKnown RBP17.48■□□□□ 0.39
SMCO4-201ENST00000298966 PRAMEF6Q5VXH4 476 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 ITLN1Q8WWA0 313 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 GTF3AQ92664 365 aaKnown RBP17.48■□□□□ 0.39
SMCO4-201ENST00000298966 CHST6Q9GZX3 395 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 C7orf69Q9H7B7 122 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 UNKLQ9H9P5 680 aaKnown RBP17.48■□□□□ 0.39
SMCO4-201ENST00000298966 C1orf123Q9NWV4 160 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 NPTNQ9Y639 398 aa17.48■□□□□ 0.39
SMCO4-201ENST00000298966 hCG_1807616A0A1W2PRN6 198 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 SRRM5B3KS81 715 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 KNG1P01042 644 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 GLRA1P23415 457 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 BTCP35070 178 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 TAS2R19P59542 299 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 SIGIRRQ6IA17 410 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 TMEM229BQ8NBD8 167 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 OCSTAMPQ9BR26 566 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 ZMAT3Q9HA38 289 aaKnown RBP17.47■□□□□ 0.39
SMCO4-201ENST00000298966 HRASLSQ9HDD0 168 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 COPZ2Q9P299 210 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 ANAPC10Q9UM13 185 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 KCNK7Q9Y2U2 307 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 ARHGAP32A7KAX9 2087 aa17.47■□□□□ 0.39
SMCO4-201ENST00000298966 PRKDCP78527 4128 aaKnown RBP17.46■□□□□ 0.39
SMCO4-201ENST00000298966 TANC2Q9HCD6 1990 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 hCG_2014768A0A024R1R8 64 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 SH2D1BO14796 132 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 IRF2P14316 349 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 DTYMKP23919 212 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 PRTN3P24158 256 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 IKZF1Q13422 519 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 MPPED2Q15777 294 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 PLA1AQ53H76 456 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 ACTBL2Q562R1 376 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 NKAPLQ5M9Q1 402 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 PLET1Q6UQ28 207 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 TRAPPC6BQ86SZ2 158 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 SIGLECL1Q8N7X8 197 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 LRRC29Q8WV35 223 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 DPAGT1Q9H3H5 408 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 RIMS4Q9H426 269 aaPredicted RBP17.46■□□□□ 0.39
SMCO4-201ENST00000298966 IFT46Q9NQC8 304 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 UFSP2Q9NUQ7 469 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 RNF7Q9UBF6 113 aa17.46■□□□□ 0.39
SMCO4-201ENST00000298966 CMYA5Q8N3K9 4069 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 LRRC30A6NM36 301 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 MCRIP1C9JLW8 97 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 F8VVB4 439 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 F8VWA3 439 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 SSX5O60225 188 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 FSHBP01225 129 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 IGHV2-5P01817 119 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 AKAIN1P0CW23 69 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 NAT1P18440 290 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 MDH2P40926 338 aaKnown RBP17.45■□□□□ 0.38
SMCO4-201ENST00000298966 CCL8P80075 99 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 ACP7Q6ZNF0 438 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 C1orf87Q8N0U7 546 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 GCM1Q9NP62 436 aa17.45■□□□□ 0.38
SMCO4-201ENST00000298966 DEGS1O15121 323 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 LHBP01229 141 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 MT-ND4P03905 459 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 KCNJ3P48549 501 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 IL13RA1P78552 427 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 SRSF7Q16629 238 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMCO4-201ENST00000298966 ATAD3CQ5T2N8 411 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 C6orf201Q7Z4U5 140 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 MOGAT3Q86VF5 341 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 NUDCD2Q8WVJ2 157 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 CREB3L1Q96BA8 519 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 TIMD4Q96H15 378 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 ZNF488Q96MN9 340 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 DUX5Q96PT3 197 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 CMSS1Q9BQ75 279 aaKnown RBP17.44■□□□□ 0.38
SMCO4-201ENST00000298966 MARVELD1Q9BSK0 173 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 SAP30LQ9HAJ7 183 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 NLKQ9UBE8 527 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms