RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 EFNA4P52798 201 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 KRBOX4Q5JUW0 171 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF880Q6PDB4 577 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 TMEM185AQ8NFB2 350 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 COQ2Q96H96 371 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 PRRT1Q99946 306 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 MMP28Q9H239 520 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 EHFQ9NZC4 300 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 SCP2D1Q9UJQ7 156 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 MGAT4AQ9UM21 535 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 USF3Q68DE3 2245 aa17.29■□□□□ 0.36
PACSIN3-201ENST00000298838 NDUFA2O43678 99 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 F12P00748 615 aaPredicted RBP17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 CDK10Q15131 360 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 SLC36A1Q7Z2H8 476 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 ARRDC1Q8N5I2 433 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 FAM216BQ8N7L0 139 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 CCDC107Q8WV48 283 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 IGFBPL1Q8WX77 278 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 MED30Q96HR3 178 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 NECAP2Q9NVZ3 263 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 KIF25Q9UIL4 384 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 TCRBP04435 133 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF735P0CB33 412 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 RCC1P18754 421 aaPredicted RBP17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 EDDM3AQ14507 147 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 RBMS2Q15434 407 aaKnown RBP17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 SCGB2B2Q4G0G5 96 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 OVCH2Q7RTZ1 564 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 ZNF295-AS1Q8N0V1 137 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 C14orf79Q96F83 325 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 CHODLQ9H9P2 273 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 SLC2A8Q9NY64 477 aa17.28■□□□□ 0.36
PACSIN3-201ENST00000298838 MEIKINA0A087WXM9 373 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 A0A1B0GW55 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 TRDCB7Z8K6 153 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L2P0CJ85 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L3P0CJ86 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L4P0CJ87 422 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L5P0CJ88 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L6P0CJ89 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L7P0CJ90 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 SELLP14151 372 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4L9Q6RFH8 374 aaPredicted RBP17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 IDO2Q6ZQW0 420 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 TMEM17Q86X19 198 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 UPRTQ96BW1 309 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 TIMD4Q96H15 378 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 TMEM246Q9BRR3 403 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 MBNL3Q9NUK0 354 aaKnown RBP17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 NUDT15Q9NV35 164 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 DUX4Q9UBX2 424 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 NUBP2Q9Y5Y2 271 aa17.27■□□□□ 0.36
PACSIN3-201ENST00000298838 CRYBG3Q68DQ2 2970 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 FABP7O15540 132 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 IGHV2-70P01814 119 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 GSTT2P0CG29 244 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 COL8A1P27658 744 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 TSPAN5P62079 268 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 CREB3L1Q96BA8 519 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 A0A1B0GVG6 124 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 FUOMA2VDF0 154 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 SDCBPO00560 298 aaPredicted RBP17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 ADAM20O43506 726 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 NDUFS7O75251 213 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 NDUFB6O95139 128 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 GLIPR1P48060 266 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 HLA-DRB3P79483 266 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 MUC20Q8N307 709 aaPredicted RBP17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 RAB1CQ92928 201 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 GINS4Q9BRT9 223 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 C20orf85Q9H1P6 137 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 KAAG1Q9UBP8 84 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 DOPEY2Q9Y3R5 2298 aa17.26■□□□□ 0.35
PACSIN3-201ENST00000298838 TRAV39A0A0B4J263 110 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 TNFRSF13BO14836 293 aaPredicted RBP17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 PPIHO43447 177 aaKnown RBP17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 OR5H8P0DN80 308 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 P2RX3P56373 397 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 EDDM3BP56851 147 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 TPRX1Q8N7U7 411 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 OR4A4PQ8NGN8 299 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 MARVELD1Q9BSK0 173 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 KCNIP1Q9NZI2 227 aa17.25■□□□□ 0.35
PACSIN3-201ENST00000298838 SCTP09683 121 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 ERP29P30040 261 aaKnown RBP17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 TMEM33P57088 247 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 BTN2A1Q7KYR7 527 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 PSMG3-AS1Q96PY0 264 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 SLC25A21Q9BQT8 299 aaPredicted RBP17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 SLC25A10Q9UBX3 287 aaPredicted RBP17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 TRAV6A0A075B6T7 132 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 ODAMA1E959 279 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 CTXN2P0C2S0 81 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 CARTPTQ16568 116 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 IGSF11Q5DX21 431 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 AVPI1Q5T686 147 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 C6orf183Q5T699 404 aa17.24■□□□□ 0.35
PACSIN3-201ENST00000298838 LYPD2Q6UXB3 125 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms