RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 PTPMT1Q8WUK0 201 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-201ENST00000297423 C2orf88Q9BSF0 95 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 OPN3Q9H1Y3 402 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-201ENST00000297423 K7N7A8 449 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 HSD17B7P56937 341 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 ZXDAP98168 799 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 ZNF92Q03936 586 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 ASB10Q8WXI3 467 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-201ENST00000297423 CCDC74BQ96LY2 380 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 DUSP23Q9BVJ7 150 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 SERINC1Q9NRX5 453 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 COL4A2P08572 1712 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 IFNA1P01562 189 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 ISG15P05161 165 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 EGR1P18146 543 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 PMELP40967 661 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 FUT7Q11130 342 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 MALLQ13021 153 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 NOL4LQ96MY1 436 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-201ENST00000297423 TP53RKQ96S44 253 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 P4HTMQ9NXG6 502 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 ST3GAL6Q9Y274 331 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 TP53TG5Q9Y2B4 290 aa12.92□□□□□ -0.34
SPIDR-201ENST00000297423 JOSD1Q15040 202 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-201ENST00000297423 IGHV3-64DA0A0J9YX35 117 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 C3orf85A0A1B0GTC6 90 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 MS4A18H0YCH9 400 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 SPINK4O60575 86 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 MS4A18Q3C1V0 323 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 WDFY1Q8IWB7 410 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 REV3LO60673 3130 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 DVL1O14640 695 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 ANOS1P23352 680 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 FAM78BQ5VT40 261 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 OR51I2Q9H344 312 aa12.91□□□□□ -0.34
SPIDR-201ENST00000297423 IGHV1OR21-1A0A087WYE8 117 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 IGKV1-9A0A0C4DH69 117 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 DXOO77932 396 aaKnown RBP12.9□□□□□ -0.34
SPIDR-201ENST00000297423 TMEM187Q14656 261 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 CALHM1Q8IU99 346 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 PRSS50Q9UI38 385 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 RALGAPA1Q6GYQ0 2036 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 OPN1MWP04001 364 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 QRFPP83859 136 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 BSXQ3C1V8 233 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 TK1P04183 234 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 RPLP1P05386 114 aaKnown RBP12.9□□□□□ -0.34
SPIDR-201ENST00000297423 PLA2G5P39877 138 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 OR3A1P47881 315 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 SLC25A45Q8N413 288 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 CCNL2Q96S94 520 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-201ENST00000297423 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
SPIDR-201ENST00000297423 SIAH2O43255 324 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 MPZP25189 248 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 S100GP29377 79 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 S100A7P31151 101 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 LPAL2Q16609 132 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 DPPA3Q6W0C5 159 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 OR10S1Q8NGN2 331 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 VN1R17PQ8TDU5 208 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 TMEM171Q8WVE6 324 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 BOD1Q96IK1 185 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 RPRMQ9NS64 109 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 CBY3A6NI87 242 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 C10orf142B7Z368 130 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-201ENST00000297423 SERPINA7P05543 415 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 KRTDAPP60985 99 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 BAGE3Q86Y29 109 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 BAGE2Q86Y30 109 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF737O75373 536 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
SPIDR-201ENST00000297423 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 DEGS2Q6QHC5 323 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 BTF3L4Q96K17 158 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 TXN2Q99757 166 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms