RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 CCDC160A6NGH7 325 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 RBP4P02753 201 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 CCL3L1P16619 93 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 SOX6P35712 828 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ARF6P62330 175 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 PLAC9Q5JTB6 97 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 FAM120AOSQ5T036 256 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 METTL11BQ5VVY1 283 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 C1orf229Q6ZS94 237 aaPredicted RBP10.88□□□□□ -0.67
CCDC42-201ENST00000293845 Q6ZTK2 550 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 C11orf42Q8N5U0 333 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 Q8N7P7 452 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ARHGAP5-AS1Q96IT6 56 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 PECRQ9BY49 303 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ATG5Q9H1Y0 275 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ABCG5Q9H222 651 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 UNKLQ9H9P5 680 aaKnown RBP10.88□□□□□ -0.67
CCDC42-201ENST00000293845 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ETAA1Q9NY74 926 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 TAS2R3Q9NYW6 316 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
CCDC42-201ENST00000293845 MEIKINA0A087WXM9 373 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 A0A0A6YYH2 397 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 UBE2QL1A1L167 161 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 DPPA5A6NC42 116 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 A6NJ64 397 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 C17orf98A8MV24 154 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 MFNGO00587 321 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 TOX4O94842 621 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 FSHBP01225 129 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 MT-ND4P03905 459 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 CGB3P0DN86 165 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 CGB7P0DN87 165 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 ARL6IP1Q15041 203 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 UBE2NLQ5JXB2 153 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
CCDC42-201ENST00000293845 RTN4RL2Q86UN3 420 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 DYRK2Q92630 601 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 FAAP24Q9BTP7 215 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 ING3Q9NXR8 418 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
CCDC42-201ENST00000293845 SVEP1Q4LDE5 3571 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 hCG_1809904A0A1W2PP81 198 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 A0A1W2PPE2 198 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 A0A1W2PR64 198 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 A0A1W2PRV1 198 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF729A6NN14 1252 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 SERPINE3A8MV23 424 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 NAPSAO96009 420 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 HIST1H1DP16402 221 aaKnown RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 PRTN3P24158 256 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 MZT2AQ6P582 158 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 SAMD12Q8N8I0 201 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF565Q8N9K5 539 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 OR13A1Q8NGR1 328 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 MRPL30Q8TCC3 161 aaKnown RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 GAL3ST2Q9H3Q3 398 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 METTL8Q9H825 291 aaKnown RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 LINC00574Q9H8X3 128 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 MBNL3Q9NUK0 354 aaKnown RBP10.86□□□□□ -0.67
CCDC42-201ENST00000293845 COMMD3Q9UBI1 195 aa10.86□□□□□ -0.67
CCDC42-201ENST00000293845 TRBV6-6A0A0A6YYG2 114 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 MEX3AA1L020 520 aaKnown RBP10.85□□□□□ -0.67
CCDC42-201ENST00000293845 INAFM1C9JVW0 142 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 APOA1P02647 267 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 HNF1AP20823 631 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 GLP1RP43220 463 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 FOXB2Q5VYV0 432 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 VMO1Q7Z5L0 202 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF554Q86TJ5 538 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 OR4K15Q8NH41 348 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 NANPQ8TBE9 248 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 TNFRSF14Q92956 283 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 DGCR14Q96DF8 476 aaKnown RBP10.85□□□□□ -0.67
CCDC42-201ENST00000293845 PCGF1Q9BSM1 259 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 SLIRPQ9GZT3 109 aaKnown RBP10.85□□□□□ -0.67
CCDC42-201ENST00000293845 AK3Q9UIJ7 227 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 CDC42EP3Q9UKI2 254 aa10.85□□□□□ -0.67
CCDC42-201ENST00000293845 A0A075B6Q4 140 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 KBTBD11-OT1A0A1B0GTJ5 212 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 NPIPB11E5RHQ5 1161 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 ORC5O43913 435 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 CLPXO76031 633 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 GSTP1P09211 210 aaKnown RBP10.84□□□□□ -0.67
CCDC42-201ENST00000293845 IGHV1-8P0DP01 117 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 GNB3P16520 340 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 GZMHP20718 246 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 ZNF260Q3ZCT1 412 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
CCDC42-201ENST00000293845 C6orf183Q5T699 404 aa10.84□□□□□ -0.67
CCDC42-201ENST00000293845 OLFML2AQ68BL7 652 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms