RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SLC45A2Q9UMX9 530 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 M0QZK8 103 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 Q56UQ5 140 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 HES3Q5TGS1 186 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 R3HDM4Q96D70 268 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 STARD4Q96DR4 205 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 IER3P46695 156 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF488Q96MN9 340 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 P4HTMQ9NXG6 502 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 PITPNC1Q9UKF7 332 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 RGPD3A6NKT7 1758 aaPredicted RBP13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 RGPD4Q7Z3J3 1758 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 APELAP0DMC3 54 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 CPEB3Q8NE35 698 aaKnown RBP13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 CLN8Q9UBY8 286 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 SP1P08047 785 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 FGF2P09038 288 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 PPOXP50336 477 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 PSG5Q15238 335 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 TIMD4Q96H15 378 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 RARRES2Q99969 163 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 IGHV1OR15-9A0A0B4J2B8 117 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 C4orf51C9J302 202 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 AGFG2O95081 481 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 NGFRP08138 427 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF766Q5HY98 468 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 LHX9Q9NQ69 397 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 PLXNB2O15031 1838 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 ACER2Q5QJU3 275 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 LILRB1Q8NHL6 650 aaPredicted RBP13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 GPHA2Q96T91 129 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SMOC1Q9H4F8 434 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC7A10Q9NS82 523 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF638Q14966 1978 aaKnown RBP13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 PRRG2O14669 202 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SH2D2AQ9NP31 389 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SIRT7Q9NRC8 400 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 ELOBQ15370 118 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 TUSC5Q8IXB3 177 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 DTD1Q8TEA8 209 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 RNF133Q8WVZ7 376 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 RASL10BQ96S79 203 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC26A1Q9H2B4 701 aa13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 SF3B6Q9Y3B4 125 aaKnown RBP13.43□□□□□ -0.26
SHROOM4-201ENST00000289292 B4DEV8 164 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 CIDEAO60543 219 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 LYZP61626 148 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 OR2M7Q8NG81 312 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 OR2M5A3KFT3 312 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 RPL13AP40429 203 aaKnown RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 TDHQ8IZJ6 230 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 A0A1W2PQD3 144 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 DHRS11Q6UWP2 260 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 ABHD3Q8WU67 409 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 DSPPQ9NZW4 1301 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 HOXC4P09017 264 aaPredicted RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 HOGA1Q86XE5 327 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 TLNRD1Q9H1K6 362 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 SRSF10O75494 262 aaKnown RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 SNRPCP09234 159 aaKnown RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 UBE2L3P68036 154 aaKnown RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 VMA21Q3ZAQ7 101 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF552Q9H707 407 aaPredicted RBP13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 NAGKQ9UJ70 344 aa13.42□□□□□ -0.26
SHROOM4-201ENST00000289292 CDIPTO14735 213 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 NDUFB3O43676 98 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 DEDDO75618 318 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 RPS4Y1P22090 263 aaKnown RBP13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 WDR73Q6P4I2 378 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 WDR61Q9GZS3 305 aaKnown RBP13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 SH3BGRL3Q9H299 93 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 FBP1P09467 338 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 HOXC8P31273 242 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 LRRC3BQ96PB8 259 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 PITX3O75364 302 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 HAND1O96004 215 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 ANKRD55Q3KP44 614 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 HKR1P10072 659 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 CCL3P10147 92 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 LRRC10Q5BKY1 277 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 TM4SF19Q96DZ7 209 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 OR2H1Q9GZK4 316 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 OR51M1Q9H341 326 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 WASHC3Q9Y3C0 194 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms