RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 SLC35G3Q8N808 338 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 ZNF565Q8N9K5 539 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 TMED6Q8WW62 240 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 SLC5A7Q9GZV3 580 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 BARX1Q9HBU1 254 aaPredicted RBP16.36■□□□□ 0.21
BRAF-201ENST00000288602 ZNF71Q9NQZ8 489 aaPredicted RBP16.36■□□□□ 0.21
BRAF-201ENST00000288602 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
BRAF-201ENST00000288602 KIR2DS1A0A191URI9 304 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 DEDDO75618 318 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 CGAP01215 116 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 TPT1P13693 172 aaKnown RBP16.35■□□□□ 0.21
BRAF-201ENST00000288602 KIR2DS4P43632 304 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 KCNJ3P48549 501 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 IL13RA2Q14627 380 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 KIR2DS1Q14954 304 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 LINC00596Q86U02 117 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 BAP18Q8IXM2 172 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 CCDC71LQ8N9Z2 235 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 PLPPR1Q8TBJ4 325 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 PHYHIPLQ96FC7 376 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 MSL2Q9HCI7 577 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 OR14J1Q9UGF5 321 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 PIEZO2Q9H5I5 2752 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 TFF1P04155 84 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 TMEM268Q5VZI3 342 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 PCSK4Q6UW60 755 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 IGFL3Q6UXB1 125 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 LRFN3Q9BTN0 628 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 SMIM3Q9BZL3 60 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 SHARPINQ9H0F6 387 aa16.35■□□□□ 0.21
BRAF-201ENST00000288602 CADP27708 2225 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 WNT9BO14905 357 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 SIGLEC5O15389 551 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 ERVK11-1P61568 191 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 SRSF7Q16629 238 aaKnown RBP eCLIP16.34■□□□□ 0.21
BRAF-201ENST00000288602 LGI3Q8N145 548 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 RBMXL3Q8N7X1 1067 aaKnown RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 BVESQ8NE79 360 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 STOML3Q8TAV4 291 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 SLC33A1O00400 549 aaPredicted RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 FGF2P09038 288 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 RPL12P30050 165 aaKnown RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 TUSC1Q2TAM9 212 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 RPL7L1Q6DKI1 246 aaKnown RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 Q6ZS92 163 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 STPG2Q8N412 459 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 USB1Q9BQ65 265 aaKnown RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 TMEM100Q9NV29 134 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 OR1A1Q9P1Q5 309 aa16.34■□□□□ 0.21
BRAF-201ENST00000288602 PURGQ9UJV8 347 aaKnown RBP16.34■□□□□ 0.21
BRAF-201ENST00000288602 IGHV1-18A0A0C4DH31 117 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 A8MXK9 166 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 K7EPK0 472 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 TSPAN4O14817 238 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 PGA5P0DJD9 388 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 SMCO1Q147U7 214 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 ASCL5Q7RTU5 278 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 FAM71E2Q8N5Q1 922 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 LRTM2Q8N967 370 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 PRRX2Q99811 253 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 NRIP2Q9BQI9 281 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 UFSP2Q9NUQ7 469 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 POLDIP2Q9Y2S7 368 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 UBE2J1Q9Y385 318 aaPredicted RBP16.33■□□□□ 0.2
BRAF-201ENST00000288602 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 SESN1Q9Y6P5 492 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 APC2O95996 2303 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 PRAMEF6Q5VXH4 476 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 BHLHA15Q7RTS1 189 aaPredicted RBP16.33■□□□□ 0.2
BRAF-201ENST00000288602 C1orf162Q8NEQ5 155 aaPredicted RBP16.33■□□□□ 0.2
BRAF-201ENST00000288602 DNAJB11Q9UBS4 358 aa16.33■□□□□ 0.2
BRAF-201ENST00000288602 ACACAQ13085 2346 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 H7C1Q1 480 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 TRIM77I1YAP6 450 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 TIMM8AO60220 97 aaPredicted RBP16.32■□□□□ 0.2
BRAF-201ENST00000288602 TUSC2O75896 110 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 Q6ZR03 302 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 OR8G5Q8NG78 346 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 OR1S2Q8NGQ3 325 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 SNIP1Q8TAD8 396 aaKnown RBP16.32■□□□□ 0.2
BRAF-201ENST00000288602 BSCL2Q96G97 398 aaPredicted RBP16.32■□□□□ 0.2
BRAF-201ENST00000288602 TMEM222Q9H0R3 208 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 ASF1BQ9NVP2 202 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 TAS2R3Q9NYW6 316 aa16.32■□□□□ 0.2
BRAF-201ENST00000288602 MBD3L4A6NDZ8 208 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 MBD3L3A6NE82 208 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 MBD3L5A6NJ08 208 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 GPR31O00270 319 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 CTRB1P17538 263 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 HLA-DRB3P79483 266 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 CTRB2Q6GPI1 263 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 OR10J5Q8NHC4 309 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 MBD3L2Q8NHZ7 208 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 RIMS4Q9H426 269 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 ERRFI1Q9UJM3 462 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 IGHV2OR16-5A0A0B4J2B6 119 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 NKX2-6A6NCS4 301 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 C11orf53Q8IXP5 236 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms