RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HEXA-AS1Q9H8Q6 139 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 ZMAT3Q9HA38 289 aaKnown RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 ING4Q9UNL4 249 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 ST3GAL6Q9Y274 331 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 POMT1Q9Y6A1 747 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TRDV1A0A1B0GX56 115 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 A0A1W2PQ09 198 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A10PA6NDY2 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A18PA6NE21 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A16PA6NEW6 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A20PA6NIJ5 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A7PA6NKC0 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A22PA8MWA6 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A12PA8MX19 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A5PA8MXJ8 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A23PA8MXZ1 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 C15orf65H3BRN8 121 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 MT-ND4P03905 459 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A15PP0C7V4 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A13PP0C7W8 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A14PP0C7W9 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FAM90A24PP0C7X0 464 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 GABRR1P24046 479 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 MAPK3P27361 379 aaPredicted RBP7.41□□□□□ -1.22
HMGN1-201ENST00000288344 GABRA5P31644 462 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 KCNJ3P48549 501 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 CAPZA1P52907 286 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 SNU13P55769 128 aaKnown RBP7.41□□□□□ -1.22
HMGN1-201ENST00000288344 EDDM3BP56851 147 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 UNC119Q13432 240 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 RSU1Q15404 277 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 TRAM1Q15629 374 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 MPV17LQ2QL34 196 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 SYT6Q5T7P8 510 aaPredicted RBP7.41□□□□□ -1.22
HMGN1-201ENST00000288344 SLC35E4Q6ICL7 350 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 GLIPR1L1Q6UWM5 242 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 Q6ZPA2 131 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF367Q7RTV3 350 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 LINC00596Q86U02 117 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 NR2C2APQ86WQ0 139 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 NKAIN3Q8N8D7 197 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 SUMF2Q8NBJ7 301 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 BVESQ8NE79 360 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 OR13A1Q8NGR1 328 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 UFD1Q92890 307 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 CPNE2Q96FN4 548 aaPredicted RBP7.41□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF714Q96N38 554 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 PPA2Q9H2U2 334 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 NDUFB11Q9NX14 153 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 GHRLQ9UBU3 117 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 FBLN5Q9UBX5 448 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 GLS2Q9UI32 602 aa7.41□□□□□ -1.22
HMGN1-201ENST00000288344 MRPS28Q9Y2Q9 187 aaKnown RBP7.41□□□□□ -1.22
HMGN1-201ENST00000288344 A0A0A6YYD4 124 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 TRAV1-2A0A0B4J238 106 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 KBTBD11-OT1A0A1B0GTJ5 212 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 GLAP06280 429 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 GTF2F2P13984 249 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF44P15621 663 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 PSMA1P25786 263 aaKnown RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 PAX6P26367 422 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 FGF9P31371 208 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM50BP56557 158 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 LOXL3P58215 753 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 BLMHQ13867 455 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 GPR176Q14439 515 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 EDDM3AQ14507 147 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 SLC22A6Q4U2R8 563 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 HSD17B12Q53GQ0 312 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 KRBOX4Q5JUW0 171 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 CCBE1Q6UXH8 406 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF782Q6ZMW2 699 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 OR4P4Q8NGL7 312 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 PPP1R35Q8TAP8 253 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF596Q8TC21 504 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 SSMEM1Q8WWF3 244 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 DYRK2Q92630 601 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 FOXRED1Q96CU9 486 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 MALSU1Q96EH3 234 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 KIRREL1Q96J84 757 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 NR1H4Q96RI1 486 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 GPER1Q99527 375 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 DPCDQ9BVM2 203 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-201ENST00000288344 TM2D1Q9BX74 207 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM133Q9H2Q1 129 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 C1RLQ9NZP8 487 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 CKLFQ9UBR5 152 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 BLOC1S6Q9UL45 172 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 MMP24Q9Y5R2 645 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 SESN1Q9Y6P5 492 aa7.4□□□□□ -1.22
HMGN1-201ENST00000288344 NBEAL1Q6ZS30 2694 aa7.4□□□□□ -1.23
HMGN1-201ENST00000288344 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 IGHV2-26A0A0B4J1V2 119 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms