RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CYYR1Q96J86 154 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 OR5M11Q96RB7 305 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 CDCA4Q9BXL8 241 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 NPFFR1Q9GZQ6 430 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 ZNF702PQ9H963 129 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 CALYQ9NYX4 217 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 DPM3Q9P2X0 92 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 CKLFQ9UBR5 152 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 ERGIC3Q9Y282 383 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 CSTBP04080 98 aaKnown RBP11.58□□□□□ -0.56
HMGN3-201ENST00000275036 CD24P25063 80 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 NFYBP25208 207 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 SSTR5P35346 364 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 SLC35A2P78381 396 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 IRF3Q14653 427 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 FAM27D1Q5T7N8 215 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 GLIPR1L1Q6UWM5 242 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 Q6ZS46 218 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 JAGN1Q8N5M9 183 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 KLHDC1Q8N7A1 406 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 ZNF596Q8TC21 504 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 MRGPRDQ8TDS7 321 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 S100A13Q99584 98 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 MND1Q9BWT6 205 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 BARHL1Q9BZE3 327 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 LINC00574Q9H8X3 128 aa11.58□□□□□ -0.56
HMGN3-201ENST00000275036 MRPS28Q9Y2Q9 187 aaKnown RBP11.58□□□□□ -0.56
HMGN3-201ENST00000275036 NPIPB11E5RHQ5 1161 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 BUB1B-PAK6H3BSN5 160 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 F2RL2O00254 374 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 ZNF780AO75290 641 aaPredicted RBP11.57□□□□□ -0.56
HMGN3-201ENST00000275036 IL1AP01583 271 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 IGHV3-7P01780 117 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 GTF2F2P13984 249 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 MYF6P23409 242 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 KCNJ3P48549 501 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 UNQ9370/PRO34162Q6UXP9 181 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 LINC00596Q86U02 117 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 Q8N2B8 174 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 ZNF565Q8N9K5 539 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 OR2T6Q8NHC8 308 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 RFESDQ8TAC1 157 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 FAM110DQ8TAY7 271 aaPredicted RBP11.57□□□□□ -0.56
HMGN3-201ENST00000275036 CFHR4Q92496 578 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 LEAP2Q969E1 77 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 SERTAD4Q9NUC0 356 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 PITPNC1Q9UKF7 332 aa11.57□□□□□ -0.56
HMGN3-201ENST00000275036 LEUTXA8MZ59 168 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 BLCAPP62952 87 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 SPHARQ15513 63 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 LTC4SQ16873 150 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-201ENST00000275036 ATAD3CQ5T2N8 411 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 TPTE2P1Q5T6R2 138 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 CDH26Q8IXH8 852 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 TMEM104Q8NE00 496 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 MYDGFQ969H8 173 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 TMED9Q9BVK6 235 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 ANKRD60Q9BZ19 345 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 BANF2Q9H503 90 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 DUSP21Q9H596 190 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 SCN3BQ9NY72 215 aa11.56□□□□□ -0.56
HMGN3-201ENST00000275036 RCC2Q9P258 522 aaKnown RBP11.56□□□□□ -0.56
HMGN3-201ENST00000275036 J3QR06 171 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 TOR1AO14656 332 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 SC5DO75845 299 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 VHLP40337 213 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 RBM39Q14498 530 aaKnown RBP11.55□□□□□ -0.56
HMGN3-201ENST00000275036 MED22Q15528 200 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 AWAT2Q6E213 333 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
HMGN3-201ENST00000275036 LRRTM1Q86UE6 522 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 OR9G1Q8NH87 305 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 UBALD1Q8TB05 177 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 WIPF2Q8TF74 440 aaPredicted RBP11.55□□□□□ -0.56
HMGN3-201ENST00000275036 MMP28Q9H239 520 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 PSG11Q9UQ72 335 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 TGP01266 2768 aa11.55□□□□□ -0.56
HMGN3-201ENST00000275036 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 H0YHG0 523 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 C15orf65H3BRN8 121 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 VSIG10L2P0DP72 767 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 MGMTP16455 207 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 MAPK3P27361 379 aaPredicted RBP11.54□□□□□ -0.56
HMGN3-201ENST00000275036 GNG10P50151 68 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 PRRX1P54821 245 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 DIAPH2-AS1Q14236 149 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 GPR176Q14439 515 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
HMGN3-201ENST00000275036 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms