RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HAND1O96004 215 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 LYL1P12980 280 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 SP6Q3SY56 376 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 LRTM2Q8N967 370 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 SYT3Q9BQG1 590 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 CABLES2Q9BTV7 478 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 SUCNR1Q9BXA5 334 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 RAXQ9Y2V3 346 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 IGHV3-13P01766 116 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 LMO1P25800 156 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 UCNP55089 124 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 CLLU1Q5K131 121 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 ACP7Q6ZNF0 438 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 MOB1BQ7L9L4 216 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 LDLRAD3Q86YD5 345 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 CCDC71LQ8N9Z2 235 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 PCDHB10Q9UN67 800 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 SPEF1Q9Y4P9 236 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 PTPRQQ9UMZ3 2332 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 IGKV1D-13A0A0B4J2D9 117 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 LINC00862A6NCI5 91 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 A6NLC8 198 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 H7C1Q1 480 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 B3GALNT1O75752 331 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 PTBP3O95758 552 aaKnown RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 IGKV1-13P0DP09 117 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 CEBPDP49716 269 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 HOXA4Q00056 320 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 FIP1L1Q6UN15 594 aaKnown RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 SLC51BQ86UW2 128 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 FAM185AQ8N0U4 392 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 RELL2Q8NC24 303 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 GLYATL2Q8WU03 294 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 MRPL24Q96A35 216 aaKnown RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 MSI2Q96DH6 328 aaKnown RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 VRK1Q99986 396 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-201ENST00000269318 JKAMPQ9P055 326 aa14.03□□□□□ -0.16
CCDC40-201ENST00000269318 CD200P41217 278 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 RND3P61587 244 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 GGNBP1Q5YKI7 109 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 LIAT1Q6ZQX7 453 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 GSX2Q9BZM3 304 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.16
CCDC40-201ENST00000269318 UFSP2Q9NUQ7 469 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 ELOVL5Q9NYP7 299 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 DUSP13Q9UII6 198 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 WIPI2Q9Y4P8 454 aa14.02□□□□□ -0.16
CCDC40-201ENST00000269318 PIEZO2Q9H5I5 2752 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 IGLV3-9A0A075B6K5 115 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 ZSCAN5BA6NJL1 495 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 NPIPB11E5RHQ5 1161 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 ATP6V1G2-DDX39BF2Z307 99 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 MPPED1O15442 326 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 PSPNO60542 156 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 MZT1Q08AG7 82 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 RAB32Q13637 225 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 IAH1Q2TAA2 248 aaPredicted RBP14.02□□□□□ -0.17
CCDC40-201ENST00000269318 PRSS54Q6PEW0 395 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 H1FOOQ8IZA3 346 aaPredicted RBP14.02□□□□□ -0.17
CCDC40-201ENST00000269318 OR2Z1Q8NG97 314 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 SECTM1Q8WVN6 248 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 C18orf12Q96KH6 178 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 OR14J1Q9UGF5 321 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 AUP1Q9Y679 476 aa14.02□□□□□ -0.17
CCDC40-201ENST00000269318 HEATR1Q9H583 2144 aaKnown RBP14.01□□□□□ -0.17
CCDC40-201ENST00000269318 ANKRD34BA5PLL1 514 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 KCNAB3O43448 404 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 BCL2L11O43521 198 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 KLF3P57682 345 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-201ENST00000269318 ZNF818PQ6ZRF7 136 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 INO80EQ8NBZ0 244 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-201ENST00000269318 PRR7Q8TB68 274 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 DCUN1D4Q92564 292 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 RRNAD1Q96FB5 475 aaKnown RBP14.01□□□□□ -0.17
CCDC40-201ENST00000269318 KIRREL1Q96J84 757 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 TP53RKQ96S44 253 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 OR5AC2Q9NZP5 309 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 TAAR3PQ9P1P4 343 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 SH3BGRL2Q9UJC5 107 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 TUBD1Q9UJT1 453 aa14.01□□□□□ -0.17
CCDC40-201ENST00000269318 TRAV39A0A0B4J263 110 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 TUBAL3A6NHL2 446 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 GPR31O00270 319 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 IFNA21P01568 189 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 CD40P25942 277 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 BEX5Q5H9J7 111 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 ZNF565Q8N9K5 539 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 OR10J5Q8NHC4 309 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 LHFPL5Q8TAF8 219 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 USB1Q9BQ65 265 aaKnown RBP14□□□□□ -0.17
CCDC40-201ENST00000269318 SLC5A7Q9GZV3 580 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 GSKIPQ9P0R6 139 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 GLS2Q9UI32 602 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 MEMO1Q9Y316 297 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 OR2W1Q9Y3N9 320 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 C3orf85A0A1B0GTC6 90 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 KANTRA0A1W2PQU2 76 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 C16orf97H3BN30 126 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms