RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 OR4A8P0C604 315 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NOVA1P51513 510 aaKnown RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RAET1LQ5VY80 246 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 HDHD3Q9BSH5 251 aaPredicted RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SPRY4Q9C004 299 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 WNT5BQ9H1J7 359 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GPR84Q9NQS5 396 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 P4HTMQ9NXG6 502 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IGLV3-32A0A0A0MS00 114 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IGHG1P01857 330 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CTSDP07339 412 aaPredicted RBP13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR5AC1P0C628 307 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CLDN17P56750 224 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PIGPP57054 158 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RPP30P78346 268 aaKnown RBP13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR2G3Q8NGZ4 309 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TOMM40LQ969M1 308 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TVP23CQ96ET8 276 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NIPSNAP3BQ9BS92 247 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF17P17021 662 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FUT3P21217 361 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GPR157Q5UAW9 335 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SLC35G3Q8N808 338 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 UCN2Q96RP3 112 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF700Q9H0M5 742 aa13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 MCTS1Q9ULC4 181 aaKnown RBP13.79□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LOC102723996A0A087X1L8 192 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IGKV1-9A0A0C4DH69 117 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 A0A1W2PNV4 684 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 THEM4Q5T1C6 240 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DMRTA1Q5VZB9 504 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 C6orf201Q7Z4U5 140 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RPS19BP1Q86WX3 136 aaKnown RBP13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 C1orf87Q8N0U7 546 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FAM89BQ8N5H3 189 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NOXO1Q8NFA2 376 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR8B12Q8NGG6 310 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ADGRG7Q96K78 797 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LIME1Q9H400 295 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SMDT1Q9H4I9 107 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NXT1Q9UKK6 140 aaKnown RBP13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DFFBO76075 338 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 MRPS11P82912 194 aaKnown RBP13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TEX38Q6PEX7 206 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DNAJC13O75165 2243 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RELNP78509 3460 aa13.78□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NBL1P41271 181 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PAX5Q02548 391 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 HNF4GQ14541 408 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DCAF10Q5QP82 559 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FBXW12Q6X9E4 464 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR2AJ1Q8NGZ0 328 aa13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SSR4P51571 173 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF121P58317 390 aaPredicted RBP13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF385AQ96PM9 386 aaKnown RBP13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ELL3Q9HB65 397 aaPredicted RBP13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NCOR2Q9Y618 2525 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 A0A0G2JMM0 328 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 A0A1W2PPB8 328 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 A0A1W2PRS3 328 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NPIPB13A6NJU9 1138 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FOXI3A8MTJ6 420 aaPredicted RBP13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 KIR3DP1A8MWS1 328 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NPIPB4C9JG80 1138 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ATP6V0CP27449 155 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 TMEM187Q14656 261 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF880Q6PDB4 577 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 SYT3Q9BQG1 590 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 AK3Q9UIJ7 227 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 HSF4Q9ULV5 492 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 MRPS18CQ9Y3D5 142 aaKnown RBP13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 WSB1Q9Y6I7 421 aa13.77□□□□□ -0.21
MAP1LC3B-201ENST00000268607 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 TMEM225BP0DP42 221 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ICAM4Q14773 271 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 RAB35Q15286 201 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 PHYHD1Q5SRE7 291 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 P4HA3Q7Z4N8 544 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FAM24AA6NFZ4 105 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ST8SIA3O43173 380 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZIC3O60481 467 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 OMGP23515 440 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 GABRR1P24046 479 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 RRADP55042 308 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FXYD4P59646 89 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ERVFC1-1P60608 527 aa13.76□□□□□ -0.21
MAP1LC3B-201ENST00000268607 HERPUD1Q15011 391 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms