RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 HIST3H3Q16695 136 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 MRM1Q6IN84 353 aaKnown RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 ZNF519Q8TB69 540 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 MS4A3Q96HJ5 214 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 FAAP24Q9BTP7 215 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 GP6Q9HCN6 339 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 IL19Q9UHD0 177 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 AUP1Q9Y679 476 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 P2RY10O00398 339 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 DAOP14920 347 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SPCS3P61009 180 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 OR5AU1Q8NGC0 362 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 OR4A4PQ8NGN8 299 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 TBX15Q96SF7 602 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SDCBPO00560 298 aaPredicted RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 FCN1O00602 326 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SSSCA1O60232 199 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 COX5AP20674 150 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ZNF93P35789 620 aaPredicted RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 PNRC1Q12796 327 aaPredicted RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 PPP1R32Q7Z5V6 425 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 MOGAT3Q86VF5 341 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SLC16A11Q8NCK7 471 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 DUSP18Q8NEJ0 188 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 C17orf47Q8NEP4 570 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 OR10A7Q8NGE5 316 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ZPLD1Q8TCW7 415 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ELF5Q9UKW6 265 aaPredicted RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 ASB1Q9Y576 335 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 MYOFQ9NZM1 2061 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 PQLC2LA1A4F0 135 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 FBLL1A6NHQ2 334 aaKnown RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 H7C1C5 153 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 NDUFB6O95139 128 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ZNF85Q03923 595 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 SSBP1Q04837 148 aaKnown RBP6.88□□□□□ -1.31
USP3-201ENST00000268049 TMEM99Q8N816 258 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
USP3-201ENST00000268049 OR2M5A3KFT3 312 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 DBX1A6NMT0 343 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 SULT1A3P0DMM9 295 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 SULT1A4P0DMN0 295 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 TAS2R45P59539 299 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 SEZ6L2Q6UXD5 910 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ZNF764Q96H86 408 aaPredicted RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 FAM60AQ9NP50 221 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 DUXBA0A1W2PPF3 345 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 TCRBV5S2A0A599 114 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 CXorf65A6NEN9 183 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 KCNAB3O43448 404 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 CRISP2P16562 243 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 BSGP35613 385 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 GPM6AP51674 278 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 LSM11P83369 360 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP3-201ENST00000268049 IZUMO4Q1ZYL8 232 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 OR1L6Q8NGR2 347 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 KLK11Q9UBX7 282 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 PPP1CCP36873 323 aaKnown RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 PABPC1L2AQ5JQF8 200 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ZNF362Q5T0B9 420 aaPredicted RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 DGAT2L6Q6ZPD8 337 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ERGIC1Q969X5 290 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 CXorf36Q9H7Y0 433 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 FLVCR1Q9Y5Y0 555 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 SOD1P00441 154 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 GCGP01275 180 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 OR5AL1P0C617 328 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 VDAC2P45880 294 aaPredicted RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 ERVS71-1P61550 626 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 GABRA6Q16445 453 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 RIMKLAQ8IXN7 391 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 HGDQ93099 445 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 MCRIP2Q9BUT9 160 aaKnown RBP6.87□□□□□ -1.31
USP3-201ENST00000268049 IKZF5Q9H5V7 419 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 INSIG2Q9Y5U4 225 aa6.87□□□□□ -1.31
USP3-201ENST00000268049 ZG16O60844 167 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 RHBDL1O75783 438 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 SLC25A4P12235 298 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms