RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ASCL4Q6XD76 172 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 DPPA2Q7Z7J5 298 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 IFI44Q8TCB0 444 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 RDH5Q92781 318 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 SYT3Q9BQG1 590 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 GGACTQ9BVM4 153 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 MTCH1Q9NZJ7 389 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 RTL6Q6ICC9 239 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 FAM53AQ6NSI3 398 aaPredicted RBP14.17□□□□□ -0.14
ZNF541-201ENST00000263351 Q6ZRM9 215 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 OR1K1Q8NGR3 316 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 HES7Q9BYE0 225 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 TAAR3PQ9P1P4 343 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 TMED3Q9Y3Q3 217 aa14.17□□□□□ -0.14
ZNF541-201ENST00000263351 MED13Q9UHV7 2174 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 VAMP5O95183 116 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 IGHV2-70P01814 119 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 CFIP05156 583 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 EIF2S3P41091 472 aaKnown RBP14.16□□□□□ -0.14
ZNF541-201ENST00000263351 PAX9P55771 341 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 UBE2KP61086 200 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 S100A12P80511 92 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 HMGN3Q15651 99 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 MPV17LQ2QL34 196 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 SMOC1Q9H4F8 434 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 ZNF552Q9H707 407 aaPredicted RBP14.16□□□□□ -0.14
ZNF541-201ENST00000263351 GPR35Q9HC97 309 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 SH2D2AQ9NP31 389 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 DOK5Q9P104 306 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 PCSK5Q92824 1860 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 S100A8P05109 93 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 CST2P09228 141 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 IAPPP10997 89 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 FUT6P51993 359 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 RAC3P60763 192 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 ELOBQ15370 118 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 ZNF429Q86V71 674 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 ZNF100Q8IYN0 542 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 IL1F10Q8WWZ1 152 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 CPNE4Q96A23 557 aaPredicted RBP14.16□□□□□ -0.14
ZNF541-201ENST00000263351 PBDC1Q9BVG4 233 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 PRDM6Q9NQX0 595 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 FAM86C1Q9NVL1 165 aa14.16□□□□□ -0.14
ZNF541-201ENST00000263351 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 LRRC3CA6NJW4 275 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 ZFP92A6NM28 416 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 TOX3O15405 576 aaPredicted RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 TRGC2P03986 189 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 RPS16P62249 146 aaKnown RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 VAMP2P63027 116 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 RHEBQ15382 184 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 C3AR1Q16581 482 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 THNSL2Q86YJ6 484 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 LYRM2Q9NU23 88 aaPredicted RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 GNG13Q9P2W3 67 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 STRAPQ9Y3F4 350 aaKnown RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 LOC102723996A0A087X1L8 192 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 C5orf49A4QMS7 147 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 HMGB3O15347 200 aaKnown RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 SCAF4O95104 1147 aaKnown RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 NR2C1P13056 603 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 SPINK14Q6IE38 97 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 LCN15Q6UWW0 184 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 AGBL5Q8NDL9 886 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 C10orf35Q96D05 121 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 RHOVQ96L33 236 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 ZNF665Q9H7R5 613 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 UBE2ZQ9H832 354 aaPredicted RBP14.15□□□□□ -0.14
ZNF541-201ENST00000263351 TUBA4BQ9H853 241 aa14.15□□□□□ -0.14
ZNF541-201ENST00000263351 ZNF816-ZNF321PA0A0X1KG74 233 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 CYB5BO43169 146 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 CBR3O75828 277 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 MMP7P09237 267 aaPredicted RBP14.14□□□□□ -0.15
ZNF541-201ENST00000263351 SELEP16581 610 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 ARL16Q0P5N6 197 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 PRDX4Q13162 271 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 COL19A1Q14993 1142 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 NMSQ5H8A3 153 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 GPR61Q9BZJ8 451 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 OR51M1Q9H341 326 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 TMPRSS5Q9H3S3 457 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 WSB1Q9Y6I7 421 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 A0A087WZY1 265 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 PSG2P11465 335 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 CXCL12P48061 93 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 MLF1P58340 268 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 OR8B8Q15620 311 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 CLEC12BQ2HXU8 276 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 UNQ6494/PRO21346Q6UXR6 183 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 CCDC71LQ8N9Z2 235 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 PLEKHF2Q9H8W4 249 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 Q9N2K0 584 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 OR1A1Q9P1Q5 309 aa14.14□□□□□ -0.15
ZNF541-201ENST00000263351 RPL36A-HNRNPH2H7BZ11 118 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 PITX3O75364 302 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 SOD3P08294 240 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 SPATA46Q5T0L3 261 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms