RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF816-ZNF321PA0A0X1KG74 233 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 OR6C6A6NF89 314 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 H3BQ15 152 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 MRPL33O75394 65 aaKnown RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 ECI1P42126 302 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 RTL6Q6ICC9 239 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 TCEAL6Q6IPX3 200 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 LCN15Q6UWW0 184 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 OR4D5Q8NGN0 318 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 LILRB1Q8NHL6 650 aaPredicted RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 TCEAL3Q969E4 200 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 CPNE4Q96A23 557 aaPredicted RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 RAB39BQ96DA2 213 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 SGCZQ96LD1 299 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 RSG1Q9BU20 258 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 C12orf49Q9H741 205 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 GNG13Q9P2W3 67 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 HSF4Q9ULV5 492 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 PPP1R3CQ9UQK1 317 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 RBM7Q9Y580 266 aaKnown RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 POMT1Q9Y6A1 747 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 IGKV1-6A0A0C4DH72 117 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 RBFOX3A6NFN3 312 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 TRDCB7Z8K6 153 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 IFNA4P05014 189 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 CST2P09228 141 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 UBE2KP61086 200 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 CTAG1AP78358 180 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 KIAA0141Q14154 515 aaPredicted RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 EXT1Q16394 746 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 MPV17LQ2QL34 196 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 OR2B11Q5JQS5 317 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 FAM53AQ6NSI3 398 aaPredicted RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 LINC00696Q6ZRV3 163 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 SELENOHQ8IZQ5 122 aaKnown RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 CCDC71LQ8N9Z2 235 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 OR2Y1Q8NGV0 311 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 OR2V1Q8NHB1 315 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 PBDC1Q9BVG4 233 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 SLC22A20A6NK97 555 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 STARD6P59095 220 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 GPR157Q5UAW9 335 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 GFI1BQ5VTD9 330 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 MRPL21Q7Z2W9 205 aaKnown RBP7.83□□□□□ -1.16
MSH4-201ENST00000263187 TMEM105Q8N8V8 129 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 LYPD6BQ8NI32 183 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 PCED1AQ9H1Q7 454 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 VSIRQ9H7M9 311 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 DECR2Q9NUI1 292 aa7.83□□□□□ -1.16
MSH4-201ENST00000263187 KMT2EQ8IZD2 1858 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 LRRC3CA6NJW4 275 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 K7N7A8 449 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 CXCL1P09341 107 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 IL13RA2Q14627 380 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 C9orf152Q5JTZ5 239 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 FAM209BQ5JX69 171 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 OR1J1Q8NGS3 322 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 CPT1CQ8TCG5 803 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 ERRFI1Q9UJM3 462 aaPredicted RBP7.82□□□□□ -1.16
MSH4-201ENST00000263187 TMED3Q9Y3Q3 217 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 RHBDL1O75783 438 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 METTL15P1P0C7V9 234 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 PSG2P11465 335 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 FGF5P12034 268 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 AGAP20933 346 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 RAB11AP62491 216 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 RPL23AP62750 156 aaKnown RBP7.82□□□□□ -1.16
MSH4-201ENST00000263187 DLK1P80370 383 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 AKR1C8PQ5T2L2 129 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 FOXL2NBQ6ZUU3 175 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 IL22RA1Q8N6P7 574 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 OR1A1Q9P1Q5 309 aa7.82□□□□□ -1.16
MSH4-201ENST00000263187 LOC102723996A0A087X1L8 192 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 GJE1A6NN92 205 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 LY86O95711 162 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 TFF1P04155 84 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ELLP55199 621 aaPredicted RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 SPSB3Q6PJ21 355 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ZNF429Q86V71 674 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 MED12LQ86YW9 2145 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ZNF100Q8IYN0 542 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CMTM1Q8IZ96 169 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ARV1Q9H2C2 271 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 RNF122Q9H9V4 155 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 KCNS2Q9ULS6 477 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 TRAPPC2LH3BP13 241 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CYB5BO43169 146 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 FKBP2P26885 142 aaKnown RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 IL11RAQ14626 422 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 HIKESHIQ53FT3 197 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 TRIM61Q5EBN2 209 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 OR2T2Q6IF00 324 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 Q6ZRM9 215 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 THOC3Q96J01 351 aaKnown RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 PLEKHF2Q9H8W4 249 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 LRFN1Q9P244 771 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms