RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
SCARF1-201ENST00000263071 CCL20P78556 96 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 BET1LQ9NYM9 111 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 OR6C3Q9NZP0 311 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 GOSR1O95249 250 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 IGHV4-34P06331 123 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 GUCA1AP43080 201 aaPredicted RBP12.36□□□□□ -0.43
SCARF1-201ENST00000263071 TNFRSF4P43489 277 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 ZNF92Q03936 586 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 TLE1Q04724 770 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 SGCBQ16585 318 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 ERASQ7Z444 233 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 FAM216AQ8WUB2 273 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 SLC46A1Q96NT5 459 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 PLPP3O14495 311 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 BMP5P22003 454 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 RRADP55042 308 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 FOXF1Q12946 379 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 IL24Q13007 206 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 SMIM21Q3B7S5 101 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 CPEB2Q7Z5Q1 589 aaKnown RBP12.36□□□□□ -0.43
SCARF1-201ENST00000263071 SGPP2Q8IWX5 399 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 PRRX2Q99811 253 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 METTL7AQ9H8H3 244 aa12.36□□□□□ -0.43
SCARF1-201ENST00000263071 IGLV1-36A0A0B4J1U3 117 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 IGHV2-70DA0A0C4DH43 119 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 C5orf63A6NC05 138 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 FOLR1P15328 257 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 BLKP51451 505 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 SCAND1P57086 179 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
SCARF1-201ENST00000263071 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 MYPOPQ86VE0 399 aaPredicted RBP12.35□□□□□ -0.43
SCARF1-201ENST00000263071 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
SCARF1-201ENST00000263071 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 ZNF217O75362 1048 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 SERPINA7P05543 415 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 CHRM2P08172 466 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 ZFP62Q8NB50 900 aaPredicted RBP12.35□□□□□ -0.43
SCARF1-201ENST00000263071 ERGIC1Q969X5 290 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 S1PR5Q9H228 398 aa12.35□□□□□ -0.43
SCARF1-201ENST00000263071 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TNFRSF10CO14798 259 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 GPR137BO60478 399 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 CCR5P51681 352 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 GNB2P62879 340 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 SLC22A24Q8N4F4 322 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 SCARF2Q96GP6 870 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 SERPINE3A8MV23 424 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TMEM225BP0DP42 221 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 FAHP16930 419 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TNFSF4P23510 183 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 RBMXP38159 391 aaKnown RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 ZNF121P58317 390 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TMEM176BQ3YBM2 270 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TMEM123Q8N131 208 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 GPX7Q96SL4 187 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 GABRG3Q99928 467 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 CEP250Q9BV73 2442 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 HSPB6O14558 160 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TTRP02766 147 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 LYL1P12980 280 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 C6orf201Q7Z4U5 140 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
SCARF1-201ENST00000263071 AQP3Q92482 292 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
SCARF1-201ENST00000263071 TRAV30A0A087WSZ9 112 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 RND2P52198 227 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF260Q3ZCT1 412 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF468Q5VIY5 522 aaPredicted RBP12.33□□□□□ -0.44
SCARF1-201ENST00000263071 DNM1P34Q6PK57 102 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 C1QL2Q7Z5L3 287 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 H1FOOQ8IZA3 346 aaPredicted RBP12.33□□□□□ -0.44
SCARF1-201ENST00000263071 TSTD1Q8NFU3 115 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 OR10S1Q8NGN2 331 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 OR1L3Q8NH93 324 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 VN1R1Q9GZP7 353 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 RALGAPA1Q6GYQ0 2036 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 MUC3AQ02505 3323 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 IGHV2OR16-5A0A0B4J2B6 119 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 VSTM2BA6NLU5 285 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 SFT2D2O95562 160 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 TOMM40O96008 361 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 PATE4P0C8F1 98 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 FCGR2AP12318 317 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms