RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 APELAP0DMC3 54 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 AREGP15514 252 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 DSCR9P59020 149 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 ROM1Q03395 351 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 PLAURQ03405 335 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 ASAH1Q13510 395 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 ZNF561Q8N587 486 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 TCEAL7Q9BRU2 100 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 UFC1Q9Y3C8 167 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 MYO5AQ9Y4I1 1855 aaKnown RBP11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SIAH2O43255 324 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 GALP22466 123 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SCARF2Q96GP6 870 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ARPC4-TTLL3A0A0A6YYG9 625 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 TIMM23BQ5SRD1 257 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 RALYQ9UKM9 306 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ASPDHA6ND91 283 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ZFPL1O95159 310 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 RAB5AP20339 215 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 C10orf113Q5VZT2 155 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 NPAS1Q99742 590 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 GPA33Q99795 319 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 CHST5Q9GZS9 411 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 GP6Q9HCN6 339 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ZNF638Q14966 1978 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 CST7O76096 145 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 TGFAP01135 160 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 EVX1P49640 407 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 ZAR1Q86SH2 424 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 IL13RA2Q14627 380 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
PDGFRB-201ENST00000261799 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 UBE2L6O14933 153 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 GP2P55259 537 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 ARF6P62330 175 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 OR4P4Q8NGL7 312 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 OR10J6PQ8NGY7 276 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 UMAD1C9J7I0 102 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 PPP1R2P9O14990 202 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 GREM1O60565 184 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 IGKV1D-16P01601 117 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 FCER1GP30273 86 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 NCCRP1Q6ZVX7 275 aaPredicted RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 RBBP6Q7Z6E9 1792 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 CTAG2O75638 210 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 GNG4P50150 75 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 Q1RN00 199 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 HIGD1AQ9Y241 93 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 A0A1W2PNV4 684 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 ERGP11308 486 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 POLR2AP24928 1970 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-201ENST00000261799 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 CDC42EP2O14613 210 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 ZPLD1Q8TCW7 415 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 ZMIZ1Q9ULJ6 1067 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 IGHV3OR16-12A0A075B7B8 117 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 TSTD3H0UI37 97 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 PPP1CCP36873 323 aaKnown RBP11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 DDB2Q92466 427 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 CLEC7AQ9BXN2 247 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 PDGFAP04085 211 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 RPL27AP46776 148 aaKnown RBP11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 LCN2P80188 198 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 Q6ZT83 130 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 SYT8Q8NBV8 401 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 RBPMSQ93062 196 aaKnown RBP11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 IL22RA2Q969J5 263 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 FLVCR2Q9UPI3 526 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 G3V3Q6 166 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 TCAPO15273 167 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 RXFP4Q8TDU9 374 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 SRXN1Q9BYN0 137 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 ZNF703Q9H7S9 590 aaPredicted RBP11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 OR2W1Q9Y3N9 320 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms