RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 A0A0A6YYH2 397 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 A6NJ64 397 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 HSPA12AO43301 675 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 MSR1P21757 451 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF684Q5T5D7 378 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 SUMF2Q8NBJ7 301 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 ABHD6Q9BV23 337 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 LHFPL6Q9Y693 200 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 TRBV5-7A0A0A0MS05 114 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 ITGB1BP1O14713 200 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 IL18BPO95998 194 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 MRPS34P82930 218 aaKnown RBP16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 FAM220AQ7Z4H9 259 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 TMEM183AQ8IXX5 376 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 TMEM38BQ9NVV0 291 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 POLR1DQ9Y2S0 133 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 EMC9Q9Y3B6 208 aa16.31■□□□□ 0.2
COL4A3BP-201ENST00000261415 TRDCB7Z8K6 153 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 DOK2O60496 412 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 AKR1C4P17516 323 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 TAGLN2P37802 199 aaKnown RBP16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR3A2P47893 321 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 EGR3Q06889 387 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF573Q86YE8 665 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR52N5Q8NH56 324 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 NPRL2Q8WTW4 380 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 FOXB1Q99853 325 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 GAL3ST2Q9H3Q3 398 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 PLA2G2EQ9NZK7 142 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 PRSS50Q9UI38 385 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 MRM2Q9UI43 246 aaKnown RBP16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 TRAV8-7A0A075B6U6 113 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 SLC17A2O00624 439 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 PRRG2O14669 202 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 CNEP1R1Q8N9A8 125 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 NEK7Q8TDX7 302 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 ABHD5Q8WTS1 349 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR52A1Q9UKL2 312 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 IKZF2Q9UKS7 526 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF835Q9Y2P0 537 aa16.3■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF705GA8MUZ8 300 aaPredicted RBP16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 DANCRP0C864 163 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR13C7P0DN81 318 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 B4GALT1P15291 398 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 KIR2DL2P43627 348 aaPredicted RBP16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF616Q08AN1 781 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 FOXF2Q12947 444 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 RAB35Q15286 201 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 DMRTA1Q5VZB9 504 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR13C3Q8NGS6 347 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 FRZBQ92765 325 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR8B4Q96RC9 309 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 ABHD16AO95870 558 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 CSN2P05814 226 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 APLNRP35414 380 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR3A1P47881 315 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 NPY4RP50391 375 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 ENDOGQ14249 297 aaKnown RBP16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 KCTD18Q6PI47 426 aaPredicted RBP16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 GAB2Q9UQC2 676 aa16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 STRAPQ9Y3F4 350 aaKnown RBP16.29■□□□□ 0.2
COL4A3BP-201ENST00000261415 SEC11BP0C7V7 166 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 FOXG1P55316 489 aaPredicted RBP16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 DLK1P80370 383 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 ROM1Q03395 351 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 FAM27BQ5VT28 67 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 FBXW9Q5XUX1 488 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 FJX1Q86VR8 437 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 DOLPP1Q86YN1 238 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR2AJ1Q8NGZ0 328 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR4K15Q8NH41 348 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 C22orf15Q8WYQ4 148 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 TMEM106AQ96A25 262 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 COMMD4Q9H0A8 199 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 COL6A6A6NMZ7 2263 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 RTTNQ86VV8 2226 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 TK1P04183 234 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 TIMP3P35625 211 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 CAMLGP49069 296 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 ERVFRD-1P60508 538 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 UBE2KP61086 200 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 TMEM128Q5BJH2 165 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 C9orf135Q5VTT2 229 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF679Q8IYX0 411 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF101Q8IZC7 436 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 RNF166Q96A37 237 aaPredicted RBP16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 C2orf50Q96LR7 162 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 PLEKHA2Q9HB19 425 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 MEMO1Q9Y316 297 aa16.28■□□□□ 0.2
COL4A3BP-201ENST00000261415 CDC14BO60729 498 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 TNFSF13O75888 250 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 THBS4P35443 961 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 TLE4Q04727 773 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 RBPJQ06330 500 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 HIKESHIQ53FT3 197 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 ARSJQ5FYB0 599 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms