RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CSF1P09603 554 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 PGA5P0DJD9 388 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 IL24Q13007 206 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 OR5T2Q8NGG2 359 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 KAAG1Q9UBP8 84 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 CTSZQ9UBR2 303 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 MTFP1Q9UDX5 166 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 LOC105371267A0A1B0GV96 52 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 TMPRSS2O15393 492 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 MAS1P04201 325 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 CD2P06729 351 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-201ENST00000260130 PTHLHP12272 177 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 GATA3P23771 443 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 NPY4RP50391 375 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 MTCP1P56278 107 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 CHRFAM7AQ494W8 412 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 ATPAF1Q5TC12 328 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-201ENST00000260130 DCAF12L2Q5VW00 463 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 WDR25Q64LD2 544 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-201ENST00000260130 STUMQ69YW2 141 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 FAAP20Q6NZ36 180 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 LHFPL2Q6ZUX7 228 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 TMEM106AQ96A25 262 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 ZNF488Q96MN9 340 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 CCL13Q99616 98 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 LPAR3Q9UBY5 353 aa13.94□□□□□ -0.18
SDCBP-201ENST00000260130 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
SDCBP-201ENST00000260130 CFPP27918 469 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 MMP26Q9NRE1 261 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 OR2AT4A6NND4 320 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 CXCL2P19875 107 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 HNF1AP20823 631 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 RIPPLY3P57055 190 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 NHLRC3Q5JS37 347 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 SLC36A1Q7Z2H8 476 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 SLC38A6Q8IZM9 456 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 PCNPQ8WW12 178 aaKnown RBP13.93□□□□□ -0.18
SDCBP-201ENST00000260130 RBPMSQ93062 196 aaKnown RBP13.93□□□□□ -0.18
SDCBP-201ENST00000260130 NRIP2Q9BQI9 281 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 DNTTIP1Q9H147 329 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 RDH8Q9NYR8 311 aa13.93□□□□□ -0.18
SDCBP-201ENST00000260130 TRAV8-7A0A075B6U6 113 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 MCRIP1C9JLW8 97 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 PLATP00750 562 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 AMY2BP19961 511 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 ACP7Q6ZNF0 438 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 GINS4Q9BRT9 223 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 MTCH1Q9NZJ7 389 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 HMSDA8MTL9 139 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 J3QLI3 93 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 DVL1O14640 695 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 RGS11O94810 467 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 NXPH2O95156 264 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 PSG2P11465 335 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 RAB3AP20336 220 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 ERVK11-1P61568 191 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 BAMBIQ13145 260 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 SMUG1Q53HV7 270 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 ZNF529Q6P280 563 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 OR4C16Q8NGL9 310 aa13.92□□□□□ -0.18
SDCBP-201ENST00000260130 HCKP08631 526 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 PAX2Q02962 417 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 SSBP1Q04837 148 aaKnown RBP13.91□□□□□ -0.18
SDCBP-201ENST00000260130 TMEM65Q6PI78 240 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 ZNF788Q6ZQV5 615 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 MKXQ8IYA7 352 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 SPACA5Q96QH8 159 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 C7orf69Q9H7B7 122 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 HES4Q9HCC6 221 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 INSIG2Q9Y5U4 225 aa13.91□□□□□ -0.18
SDCBP-201ENST00000260130 IGKV1D-17A0A075B6S4 117 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 LOC105371242A0A075B767 164 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 A0A1B0GW55 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 CYB5AP00167 134 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L2P0CJ85 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L3P0CJ86 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L4P0CJ87 422 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L5P0CJ88 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L6P0CJ89 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L7P0CJ90 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 S100A11P31949 105 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 GABRA2P47869 451 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 POU3F4P49335 361 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 PDZK1IP1Q13113 114 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 ASPHD2Q6ICH7 369 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 DUX4L9Q6RFH8 374 aaPredicted RBP13.9□□□□□ -0.18
SDCBP-201ENST00000260130 BATF2Q8N1L9 274 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 FAM216BQ8N7L0 139 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 ASB13Q8WXK3 278 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 SLAMF9Q96A28 289 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 MED9Q9NWA0 146 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 TAS2R4Q9NYW5 299 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms