RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RAB39BQ96DA2 213 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TVP23CQ96ET8 276 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ZNF251Q9BRH9 671 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CABLES2Q9BTV7 478 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 RSG1Q9BU20 258 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 PCED1AQ9H1Q7 454 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CDH20Q9HBT6 801 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 WFDC1Q9HC57 220 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 UFSP2Q9NUQ7 469 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 IL36RNQ9UBH0 155 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TICRRQ7Z2Z1 1910 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 RIF1Q5UIP0 2472 aaKnown RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 UBE2L5PA0A1B0GUS4 154 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PPE3 182 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 COLCA2A8K830 154 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ZIC3O60481 467 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 FABP4P15090 132 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 VDAC1P21796 283 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 SRD5A2P31213 254 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 PTGDSP41222 190 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CST9LP1Q5W188 147 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TUSC5Q8IXB3 177 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CNEP1R1Q8N9A8 125 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ZNF610Q8N9Z0 462 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 STRADBQ9C0K7 418 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 GPR35Q9HC97 309 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 GFOD1Q9NXC2 390 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 PSENENQ9NZ42 101 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 POLEQ07864 2286 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 IGKV1-27A0A075B6S5 117 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 PMS2P1A4D2B8 440 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TRDCB7Z8K6 153 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 SOX15O60248 233 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CST2P09228 141 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 SMIM6P0DI80 62 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 GABRA2P47869 451 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 RND3P61587 244 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ARG2P78540 354 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CCL20P78556 96 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 BAXQ07812 192 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 IL11RAQ14626 422 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 SPINK9Q5DT21 86 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 FAM209BQ5JX69 171 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 MYPOPQ86VE0 399 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 C1orf87Q8N0U7 546 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 MAFAQ8NHW3 353 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 KCNE4Q8WWG9 221 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 MOB3AQ96BX8 217 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 NTNG2Q96CW9 530 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 C10orf35Q96D05 121 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 SMIM7Q9BQ49 75 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 DEFB127Q9H1M4 99 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 PRO1933Q9H354 126 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 V9GYS6 101 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 IGLV3-12A0A075B6K2 115 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 IGHV1-45A0A0A0MS14 117 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 IGSF23A1L1A6 192 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SYNGR1O43759 233 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CDS2O95674 445 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 NGFP01138 241 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CTXN2P0C2S0 81 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 PSG2P11465 335 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 RPS2P15880 293 aaKnown RBP4.09□□□□□ -1.75
USP44-201ENST00000258499 CCL1P22362 96 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CD200P41217 278 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 MLF1P58340 268 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 ZNF816Q0VGE8 651 aaPredicted RBP4.09□□□□□ -1.75
USP44-201ENST00000258499 EDDM3AQ14507 147 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 FIP1L1Q6UN15 594 aaKnown RBP4.09□□□□□ -1.75
USP44-201ENST00000258499 ZNF818PQ6ZRF7 136 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SSX9Q7RTT3 188 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 FAM185AQ8N0U4 392 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 FGFBP3Q8TAT2 258 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 DNASE2BQ8WZ79 361 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CLDN23Q96B33 292 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 ANGPTL4Q9BY76 406 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 WNT5BQ9H1J7 359 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 TMPRSS5Q9H3S3 457 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 LIME1Q9H400 295 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 ZNF665Q9H7R5 613 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PPQ1 181 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CLEC18AA5D8T8 446 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CD5P06127 495 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 MMP9P14780 707 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SPEM2Q0P670 501 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 IGFBP7Q16270 282 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 C10orf128Q5T292 105 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 TMEM211Q6ICI0 200 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 ZNF880Q6PDB4 577 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SLC23A3Q6PIS1 610 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 LYPD6Q86Y78 171 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 CLEC18CQ8NCF0 446 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 LILRB1Q8NHL6 650 aaPredicted RBP4.09□□□□□ -1.75
USP44-201ENST00000258499 RFESDQ8TAC1 157 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 HPSE2Q8WWQ2 592 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 APOBEC3DQ96AK3 386 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms