RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 DMBX1Q8NFW5 382 aa12.71□□□□□ -0.37
CAB39-201ENST00000258418 PNRC2Q9NPJ4 139 aaKnown RBP12.71□□□□□ -0.37
CAB39-201ENST00000258418 GTF3C1Q12789 2109 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 SPG11Q96JI7 2443 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 LOC390937A0A1W2PQ73 354 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.38
CAB39-201ENST00000258418 HKR1P10072 659 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 ERVS71-1P61550 626 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.38
CAB39-201ENST00000258418 ZNF345Q14585 488 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 MDP1Q86V88 176 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 TMEM178AQ8NBL3 297 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 TP53RKQ96S44 253 aa12.71□□□□□ -0.38
CAB39-201ENST00000258418 F8VVB4 439 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 F8VWA3 439 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 NKX2-8O15522 239 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 CEACAM6P40199 344 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 ECI1P42126 302 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 PHYHIPLQ96FC7 376 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 SLC2A8Q9NY64 477 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
CAB39-201ENST00000258418 OSGIN2Q9Y236 505 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 NTF4P34130 210 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 OR3A1P47881 315 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 DYNLT3P51808 116 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 FLI1Q01543 452 aaPredicted RBP12.7□□□□□ -0.38
CAB39-201ENST00000258418 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 LIPGQ9Y5X9 500 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 A0A1W2PPH5 198 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 NDUFA6P56556 154 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 BAXQ07812 192 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 Q0VFX4 171 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
CAB39-201ENST00000258418 TTLL8A6PVC2 850 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 GPR137BO60478 399 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 RHBDL1O75783 438 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 ARR3P36575 388 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
CAB39-201ENST00000258418 NRIP2Q9BQI9 281 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 LY6G6EA0A0G2JKS1 128 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 NPIPB13A6NJU9 1138 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 NPIPB4C9JG80 1138 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 CTRB1P17538 263 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 AWAT1Q58HT5 328 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 RPUSD4Q96CM3 377 aaKnown RBP12.69□□□□□ -0.38
CAB39-201ENST00000258418 U3KQA8 63 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
CAB39-201ENST00000258418 SYNGR3O43761 229 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 PSG2P11465 335 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 ALDH3B1P43353 468 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 HOXA4Q00056 320 aaPredicted RBP12.69□□□□□ -0.38
CAB39-201ENST00000258418 S100PBPQ96BU1 408 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 SLC39A9Q9NUM3 307 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
CAB39-201ENST00000258418 FRYLO94915 3013 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 IFNA10P01566 189 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 IL2RAP01589 272 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 FBP1P09467 338 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 MDKP21741 143 aaPredicted RBP12.68□□□□□ -0.38
CAB39-201ENST00000258418 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAB39-201ENST00000258418 ADIRFQ15847 76 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 ZNF385CQ66K41 422 aaPredicted RBP12.68□□□□□ -0.38
CAB39-201ENST00000258418 POC1AQ8NBT0 407 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 ASB13Q8WXK3 278 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 NABP1Q96AH0 204 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 OR2C1O95371 312 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 IFNA4P05014 189 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 HNF1AP20823 631 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 QRFPP83859 136 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 C10orf128Q5T292 105 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 PRAMEF6Q5VXH4 476 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 DTX1Q86Y01 620 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 FANCFQ9NPI8 374 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 ZGRF1Q86YA3 2104 aa12.68□□□□□ -0.38
CAB39-201ENST00000258418 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 RCC2Q9P258 522 aaKnown RBP12.67□□□□□ -0.38
CAB39-201ENST00000258418 RAB19A4D1S5 217 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 ATXN7O15265 892 aaPredicted RBP12.67□□□□□ -0.38
CAB39-201ENST00000258418 RAB13P51153 203 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 ZNF83P51522 516 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 SRPXP78539 464 aa12.67□□□□□ -0.38
CAB39-201ENST00000258418 HIST2H3PS2Q5TEC6 136 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms