RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 GATSQ8NAP1 163 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 PTPMT1Q8WUK0 201 aaPredicted RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 EDAQ92838 391 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 RNF183Q96D59 192 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 PDCD11Q14690 1871 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MUC21A0A0G2JKD1 596 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MUC21A0A140T8X8 626 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 CTDSPLO15194 276 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 GNB3P16520 340 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 ZNF689Q96CS4 500 aaPredicted RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 RPP25Q9BUL9 199 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 C1orf198Q9H425 327 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 ERRFI1Q9UJM3 462 aaPredicted RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 RPL36A-HNRNPH2H7BZ11 118 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 XCR1P46094 333 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 SRSF6Q13247 344 aaKnown RBP11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 RUNX3Q13761 415 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 EMC4Q5J8M3 183 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 RSG1Q9BU20 258 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 VN1R1Q9GZP7 353 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 MAGT1Q9H0U3 335 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 NKX2-4Q9H2Z4 354 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 SH2D2AQ9NP31 389 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 CKLFQ9UBR5 152 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 HS3ST2Q9Y278 367 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 TMED7Q9Y3B3 224 aa11.74□□□□□ -0.53
COLGALT1-201ENST00000252599 TDRD15B5MCY1 1934 aaKnown RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 DPRXA6NFQ7 191 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 DAZLQ92904 295 aaKnown RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 WFDC1Q9HC57 220 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 GPR27Q9NS67 375 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 TRBV5-4A0A0C4DH59 114 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 PLPP2O43688 288 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 HSBP1O75506 76 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 HLA-DQA2P01906 255 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 LAMP2P13473 410 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 CPMP14384 443 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 F2RP25116 425 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 SLC18B1Q6NT16 456 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 OR4K13Q8NH42 304 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 PHF7Q9BWX1 381 aaPredicted RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 C1orf123Q9NWV4 160 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 PRSS50Q9UI38 385 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 TUBD1Q9UJT1 453 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 SOX21Q9Y651 276 aaPredicted RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 LINC01553A4QN01 128 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 CFIP05156 583 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 HPNP05981 417 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 HERV-K104P61576 105 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 ROM1Q03395 351 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 PLCXD2Q0VAA5 305 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 TM4SF20Q53R12 229 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 PRICKLE2Q7Z3G6 844 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 VN1R2Q8NFZ6 395 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
COLGALT1-201ENST00000252599 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 HTR1DP28221 377 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 CST6Q15828 149 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 ANKRD33Q7Z3H0 272 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 OR2V2Q96R30 315 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 PLA2G3Q9NZ20 509 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 MRM2Q9UI43 246 aaKnown RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 UBE2J1Q9Y385 318 aaPredicted RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 PRUNE2Q8WUY3 3088 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 A0A087WWC5 75 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 PLPP1O14494 284 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 FABP2P12104 132 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 LIM2P55344 173 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 PPP1CBP62140 327 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 RAE1P78406 368 aaKnown RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 ZNF90Q03938 601 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 ARTNQ5T4W7 220 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 C12orf73Q69YU5 71 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 MBD3L1Q8WWY6 194 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 MCHR1Q99705 422 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 GABRG3Q99928 467 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 PLA2G12AQ9BZM1 189 aa11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 ELL3Q9HB65 397 aaPredicted RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
COLGALT1-201ENST00000252599 HHLA2Q9UM44 414 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms