RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MOB3AQ96BX8 217 aa16.3■□□□□ 0.2
SNX4-201ENST00000251775 DMDP11532 3685 aa16.3■□□□□ 0.2
SNX4-201ENST00000251775 EPHA1P21709 976 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 CARD18P57730 90 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 ZNF124Q15973 351 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 ODF3L1Q8IXM7 274 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 TMEM252Q8N6L7 170 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 OR5C1Q8NGR4 320 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 SLC25A31Q9H0C2 315 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 PLEKHF2Q9H8W4 249 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 DOCK10Q96BY6 2186 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 ARGFXA6NJG6 315 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 ZNF716A6NP11 495 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 ZNF732B4DXR9 585 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 PHOX2AO14813 284 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 HSPA12AO43301 675 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 DNPH1O43598 174 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 SYNGR3O43761 229 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 CXCL13O43927 109 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 PATE4P0C8F1 98 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 NKX2-1P43699 371 aaPredicted RBP16.29■□□□□ 0.2
SNX4-201ENST00000251775 UCP3P55916 312 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 HLA-DRB3P79483 266 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 GPR137CQ8N3F9 429 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 C10orf35Q96D05 121 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 PACRGQ96M98 296 aaPredicted RBP16.29■□□□□ 0.2
SNX4-201ENST00000251775 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 METTL9Q9H1A3 318 aa16.29■□□□□ 0.2
SNX4-201ENST00000251775 LYRM2Q9NU23 88 aaPredicted RBP16.29■□□□□ 0.2
SNX4-201ENST00000251775 LRRC3CA6NJW4 275 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 CDS2O95674 445 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 RUNX1Q01196 453 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 RAB35Q15286 201 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 C4orf17Q53FE4 359 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 ALKBH3Q96Q83 286 aaPredicted RBP16.28■□□□□ 0.2
SNX4-201ENST00000251775 HIST1H2BLQ99880 126 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 SSSCA1O60232 199 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 IL2RGP31785 369 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 DYNLT3P51808 116 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 RPL23AP62750 156 aaKnown RBP16.28■□□□□ 0.2
SNX4-201ENST00000251775 WIPI1Q5MNZ9 446 aaPredicted RBP16.28■□□□□ 0.2
SNX4-201ENST00000251775 SLC23A3Q6PIS1 610 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 DPPA2Q7Z7J5 298 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 CCDC71LQ8N9Z2 235 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 KCNE4Q8WWG9 221 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 DEPPQ9NTK1 212 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 TMEM38BQ9NVV0 291 aa16.28■□□□□ 0.2
SNX4-201ENST00000251775 IGKV1-27A0A075B6S5 117 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 B4E171 279 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 TRDCB7Z8K6 153 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 IGHEP01854 428 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 B4GALT1P15291 398 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 TCN2P20062 427 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 AADACP22760 399 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 TSPAN7P41732 249 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 LPAL2Q16609 132 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 TIPARPQ7Z3E1 657 aaKnown RBP16.27■□□□□ 0.2
SNX4-201ENST00000251775 P4HA3Q7Z4N8 544 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 C1orf87Q8N0U7 546 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 RBMXL1Q96E39 390 aaKnown RBP16.27■□□□□ 0.2
SNX4-201ENST00000251775 RCC1LQ96I51 464 aaKnown RBP16.27■□□□□ 0.2
SNX4-201ENST00000251775 MAGT1Q9H0U3 335 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 CALHM2Q9HA72 323 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 C3orf85A0A1B0GTC6 90 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 CST2P09228 141 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 ZNF32P17041 273 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 CLDN15P56746 228 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 Q6ZPA2 131 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 OR5R1Q8NH85 324 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 OR1F12Q8NHA8 337 aa16.27■□□□□ 0.2
SNX4-201ENST00000251775 B4DEV8 164 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 CST7O76096 145 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 RND2P52198 227 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 CXorf66Q5JRM2 361 aaPredicted RBP16.26■□□□□ 0.19
SNX4-201ENST00000251775 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 AAED1Q7RTV5 226 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 RNASE11Q8TAA1 199 aaKnown RBP16.26■□□□□ 0.19
SNX4-201ENST00000251775 GNPNAT1Q96EK6 184 aaPredicted RBP16.26■□□□□ 0.19
SNX4-201ENST00000251775 ADGRG7Q96K78 797 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 HIPK2Q9H2X6 1198 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 GEMIN2O14893 280 aaKnown RBP16.26■□□□□ 0.19
SNX4-201ENST00000251775 MPPED1O15442 326 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 TRAPPC6AO75865 159 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 PGA5P0DJD9 388 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 FUT3P21217 361 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 CD200P41217 278 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 PIGYQ3MUY2 71 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 AKR1C8PQ5T2L2 129 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 FAM90A2PQ658T7 463 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 STX12Q86Y82 276 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 C1orf210Q8IVY1 113 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 ZNF100Q8IYN0 542 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 OR10D3Q8NH80 312 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 FGFBP3Q8TAT2 258 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 MISP3Q96FF7 219 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 SNX22Q96L94 193 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 C2orf88Q9BSF0 95 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 TMEM222Q9H0R3 208 aa16.26■□□□□ 0.19
SNX4-201ENST00000251775 ZNF286AQ9HBT8 521 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms