RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 MAP1BP46821 2468 aaKnown RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 F5H0A9 414 aaPredicted RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 CDIPTO14735 213 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 SH2D1BO14796 132 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 MPPED1O15442 326 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 NXPH2O95156 264 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 GCH1P30793 250 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 CEACAM8P31997 349 aaPredicted RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 P2RX3P56373 397 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF565Q8N9K5 539 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 GLYATL2Q8WU03 294 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 MRPL24Q96A35 216 aaKnown RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 GSKIPQ9P0R6 139 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 TMED3Q9Y3Q3 217 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 hCG_1807616A0A1W2PRN6 198 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 C1QTNF9BB2RNN3 333 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 K7EM74 188 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 GPR31O00270 319 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 BET1O15155 118 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 OR2H2O95918 312 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 C1QTNF9P0C862 333 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 GNRHRP30968 328 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 TOR2AQ5JU69 321 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF324BQ6AW86 544 aaPredicted RBP19.4■□□□□ 0.7
HOXD9-201ENST00000249499 SHARPINQ9H0F6 387 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 OR5AC2Q9NZP5 309 aa19.4■□□□□ 0.7
HOXD9-201ENST00000249499 SLC33A1O00400 549 aaPredicted RBP19.39■□□□□ 0.7
HOXD9-201ENST00000249499 MLNRO43193 412 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 TIMM8AO60220 97 aaPredicted RBP19.39■□□□□ 0.7
HOXD9-201ENST00000249499 SMCO1Q147U7 214 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 PAN3Q58A45 887 aaKnown RBP19.39■□□□□ 0.7
HOXD9-201ENST00000249499 BEX5Q5H9J7 111 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 PCSK4Q6UW60 755 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 RRNAD1Q96FB5 475 aaKnown RBP19.39■□□□□ 0.7
HOXD9-201ENST00000249499 PFDN2Q9UHV9 154 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 GLS2Q9UI32 602 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 TINAGQ9UJW2 476 aa19.39■□□□□ 0.7
HOXD9-201ENST00000249499 ESPL1Q14674 2120 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 PIGBOS1A0A0B4J2F0 54 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 IGKV1-6A0A0C4DH72 117 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 C3orf85A0A1B0GTC6 90 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 AANATQ16613 207 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 ZNF497Q6ZNH5 498 aa19.39■□□□□ 0.69
HOXD9-201ENST00000249499 H0YL77 283 aa19.38■□□□□ 0.69
HOXD9-201ENST00000249499 TPT1P13693 172 aaKnown RBP19.38■□□□□ 0.69
HOXD9-201ENST00000249499 ZNF474Q6S9Z5 364 aaPredicted RBP19.38■□□□□ 0.69
HOXD9-201ENST00000249499 C20orf204Q6ZNR8 217 aa19.38■□□□□ 0.69
HOXD9-201ENST00000249499 OR11L1Q8NGX0 322 aa19.38■□□□□ 0.69
HOXD9-201ENST00000249499 OR1S1Q8NH92 325 aa19.38■□□□□ 0.69
HOXD9-201ENST00000249499 I3L521 148 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 TAAR5O14804 337 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 PHF1O43189 567 aaPredicted RBP19.37■□□□□ 0.69
HOXD9-201ENST00000249499 DEDDO75618 318 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 GRPP07492 148 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 LMO1P25800 156 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 S100A10P60903 97 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 SP6Q3SY56 376 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 KIRREL1Q96J84 757 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 TMEM56Q96MV1 263 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 SLC5A7Q9GZV3 580 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 TMEM222Q9H0R3 208 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 TMEM56-RWDD3S4R434 201 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 ANKRD11Q6UB99 2663 aaPredicted RBP19.37■□□□□ 0.69
HOXD9-201ENST00000249499 DUXBA0A1W2PPF3 345 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 WNT2P09544 360 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 S100GP29377 79 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 CCDC28AQ8IWP9 274 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 C11orf53Q8IXP5 236 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 CMTM1Q8IZ96 169 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 H1FOOQ8IZA3 346 aaPredicted RBP19.37■□□□□ 0.69
HOXD9-201ENST00000249499 OR10J5Q8NHC4 309 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 LRRC20Q8TCA0 184 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 OR2W1Q9Y3N9 320 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 WIPI2Q9Y4P8 454 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 SESN1Q9Y6P5 492 aa19.37■□□□□ 0.69
HOXD9-201ENST00000249499 MFSD2BA6NFX1 497 aa19.36■□□□□ 0.69
HOXD9-201ENST00000249499 SNTB1Q13884 538 aaKnown RBP19.36■□□□□ 0.69
HOXD9-201ENST00000249499 SECTM1Q8WVN6 248 aa19.36■□□□□ 0.69
HOXD9-201ENST00000249499 RBPMSQ93062 196 aaKnown RBP19.36■□□□□ 0.69
HOXD9-201ENST00000249499 MBNL3Q9NUK0 354 aaKnown RBP19.36■□□□□ 0.69
HOXD9-201ENST00000249499 SPEF1Q9Y4P9 236 aa19.36■□□□□ 0.69
HOXD9-201ENST00000249499 EIF5AP63241 154 aaKnown RBP19.35■□□□□ 0.69
HOXD9-201ENST00000249499 IGFBP7Q16270 282 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 LYZL2Q7Z4W2 148 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 TBC1D26Q86UD7 250 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 PRR7Q8TB68 274 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 ABHD17AQ96GS6 310 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 TP53RKQ96S44 253 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 REG4Q9BYZ8 158 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 PLEKHA2Q9HB19 425 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 CYTL1Q9NRR1 136 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 TAAR3PQ9P1P4 343 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 SIRPB1O00241 398 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 CDS2O95674 445 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 HAND1O96004 215 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 RCC1P18754 421 aaPredicted RBP19.35■□□□□ 0.69
HOXD9-201ENST00000249499 UNQ6494/PRO21346Q6UXR6 183 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 Q6ZR03 302 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 ZNF818PQ6ZRF7 136 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 EIF4E3Q8N5X7 224 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms