RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 C7orf77A4D0Y5 90 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 PROB1E7EW31 1015 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 H3BP45 60 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 ARG1P05089 322 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 HEXAP06865 529 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 ATP6V0CP27449 155 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 RUNX1Q01196 453 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 IL1F10Q8WWZ1 152 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 TECTBQ96PL2 329 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 MRPS18CQ9Y3D5 142 aaKnown RBP21.83■■□□□ 1.09
RAB40C-201ENST00000248139 PRR14LQ5THK1 2151 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 COL27A1Q8IZC6 1860 aaPredicted RBP21.83■■□□□ 1.09
RAB40C-201ENST00000248139 CD300LBA8K4G0 201 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 ODF3L1Q8IXM7 274 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 MKXQ8IYA7 352 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 SUMF2Q8NBJ7 301 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 OR2G3Q8NGZ4 309 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 OR51H1Q8NH63 302 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 APH1AQ96BI3 265 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 TAAR9Q96RI9 348 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 SMCO4Q9NRQ5 59 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 PLSCR2Q9NRY7 297 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 FAM86C1Q9NVL1 165 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 IL17BQ9UHF5 180 aa21.83■■□□□ 1.09
RAB40C-201ENST00000248139 A0A1W2PR80 420 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 CBR1P16152 277 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 CEBPGP53567 150 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 OR2T2Q6IF00 324 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 OR5C1Q8NGR4 320 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 APOBEC3DQ96AK3 386 aaPredicted RBP21.83■■□□□ 1.08
RAB40C-201ENST00000248139 POM121L2Q96KW2 1035 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 C11orf1Q9H5F2 150 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 LIPGQ9Y5X9 500 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 KPTNQ9Y664 436 aa21.83■■□□□ 1.08
RAB40C-201ENST00000248139 A0A0G2JRQ6 117 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 ZNF98A6NK75 572 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 WNT5AP41221 380 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 KRBOX4Q5JUW0 171 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 IER2Q9BTL4 223 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 KLF2Q9Y5W3 355 aaPredicted RBP21.82■■□□□ 1.08
RAB40C-201ENST00000248139 BOD1L1Q8NFC6 3051 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 C19orf67A6NJJ6 358 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 A6NLC8 198 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 UMAD1C9J7I0 102 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 HABP2Q14520 560 aaPredicted RBP21.82■■□□□ 1.08
RAB40C-201ENST00000248139 TMEM252Q8N6L7 170 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 Q8NFD4 153 aa21.82■■□□□ 1.08
RAB40C-201ENST00000248139 CA6P23280 308 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 SNRPEP62304 92 aaKnown RBP21.81■■□□□ 1.08
RAB40C-201ENST00000248139 HIST1H2BAQ96A08 127 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 HIST1H2AAQ96QV6 131 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 C12orf57Q99622 126 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 A0A1W2PPH5 198 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 DYNLT3P51808 116 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 ATP1A1-AS1Q5TC04 95 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 TMEM56Q96MV1 263 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 SPRY4Q9C004 299 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 BIN3Q9NQY0 253 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 TMEM56-RWDD3S4R434 201 aa21.81■■□□□ 1.08
RAB40C-201ENST00000248139 BDP1A6H8Y1 2624 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 ZNF154Q13106 437 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 LINC00470Q9BZP3 86 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 B4GALT7Q9UBV7 327 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 GTF3C1Q12789 2109 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 K7N7A8 449 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 ATXN7O15265 892 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-201ENST00000248139 CHST1O43916 411 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 CDS2O95674 445 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 DCAF10Q5QP82 559 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 STRADBQ9C0K7 418 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 DEFB127Q9H1M4 99 aa21.8■■□□□ 1.08
RAB40C-201ENST00000248139 TRAV24A0A0B4J272 114 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 VAMP2P63027 116 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 SHEQ5VZ18 495 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 PCSK4Q6UW60 755 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 P4HA3Q7Z4N8 544 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 MRPL30Q8TCC3 161 aaKnown RBP21.79■■□□□ 1.08
RAB40C-201ENST00000248139 LAMA5O15230 3695 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 hCG_1809904A0A1W2PP81 198 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 A0A1W2PPE2 198 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 A0A1W2PPE3 182 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 A0A1W2PR64 198 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 A0A1W2PRV1 198 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 HOXA1P49639 335 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-201ENST00000248139 PLPPR1Q8TBJ4 325 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 OR1A1Q9P1Q5 309 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 ERRFI1Q9UJM3 462 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-201ENST00000248139 ATP23Q9Y6H3 246 aa21.79■■□□□ 1.08
RAB40C-201ENST00000248139 LNP1A1A4G5 178 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 FBP1P09467 338 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 SELEP16581 610 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 MPLP40238 635 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 HOXA4Q00056 320 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-201ENST00000248139 PUS1Q9Y606 427 aaKnown RBP eCLIP21.78■■□□□ 1.08
RAB40C-201ENST00000248139 PGLYRP1O75594 196 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-201ENST00000248139 NMSQ5H8A3 153 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 OR5P3Q8WZ94 311 aa21.78■■□□□ 1.08
RAB40C-201ENST00000248139 TUSC2O75896 110 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 NRN1LQ496H8 165 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 FAM24BQ8N5W8 94 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms