RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SNX22Q96L94 193 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 FXYD6Q9H0Q3 95 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 SLC23A1Q9UHI7 598 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 ZNF222Q9UK12 451 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 NBEAQ8NFP9 2946 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 A0A0B4J2A0 478 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 C9orf170A2RU37 121 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 PSPNO60542 156 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 ZG16O60844 167 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
SDF2-201ENST00000247020 PGAM2P15259 253 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 OR3A1P47881 315 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 HERV-K104P61576 105 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 HMGN3Q15651 99 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 SPRNQ5BIV9 151 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 CNTNAP3BQ96NU0 1288 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 CNTNAP3Q9BZ76 1288 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
SDF2-201ENST00000247020 CLEC4MQ9H2X3 399 aaPredicted RBP11.91□□□□□ -0.5
SDF2-201ENST00000247020 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 MGAT4CQ9UBM8 478 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 SHPKQ9UHJ6 478 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
SDF2-201ENST00000247020 DIDO1Q9BTC0 2240 aaKnown RBP11.91□□□□□ -0.5
SDF2-201ENST00000247020 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 TRBV6-7A0A0A0MS04 114 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 OOEPA6NGQ2 149 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 A8MV72 311 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 ZNF737O75373 536 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 TUSC2O75896 110 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 OR2A4O95047 310 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 SCTP09683 121 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 HLA-GP17693 338 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 CXCL3P19876 107 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 SNTB1Q13884 538 aaKnown RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 ATXN7L3Q14CW9 347 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 MST1LQ2TV78 715 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 C6orf183Q5T699 404 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 NOXA1Q86UR1 476 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 ZNF561Q8N587 486 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 DRAXINQ8NBI3 349 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 ADAD2Q8NCV1 583 aaKnown RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 PIK3IP1Q96FE7 263 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 SDSLQ96GA7 329 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 OR2A7Q96R45 310 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 PHB2Q99623 299 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 LIME1Q9H400 295 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 RANBP3Q9H6Z4 567 aaPredicted RBP11.9□□□□□ -0.5
SDF2-201ENST00000247020 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
SDF2-201ENST00000247020 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.51
SDF2-201ENST00000247020 B8ZZF3 427 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 MGST3O14880 152 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 SFT2D2O95562 160 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 PPYP01298 95 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 AKR1C4P17516 323 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 CD34P28906 385 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 PPOXP50336 477 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 RAP2BP61225 183 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 SNRPD2P62316 118 aaKnown RBP11.89□□□□□ -0.51
SDF2-201ENST00000247020 CCL8P80075 99 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 STUMQ69YW2 141 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 MUC15Q8N387 334 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 RSRP1Q9BUV0 290 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
SDF2-201ENST00000247020 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
SDF2-201ENST00000247020 FAM172BPA6NC97 362 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 K7N7A8 449 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 SLC22A5O76082 557 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 GOSR1O95249 250 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 PLAUP00749 431 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 ERP29P30040 261 aaKnown RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 ASCC1Q8N9N2 400 aaKnown RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 OR10J5Q8NHC4 309 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms