RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 TSPAN2O60636 221 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 RPS2P15880 293 aaKnown RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 ZNF708P17019 499 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 KITLGP21583 273 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 DCAF10Q5QP82 559 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 LRRC75AQ8NAA5 344 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 OR13D1Q8NGV5 346 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 ZNF519Q8TB69 540 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 OIT3Q8WWZ8 545 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 HS3ST3B1Q9Y662 390 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 CLN5O75503 358 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 KLK2P20151 261 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 MDKP21741 143 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 MLF1P58340 268 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 SSTP61278 116 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PRDX4Q13162 271 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 UBE2V2Q15819 145 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 POC1AQ8NBT0 407 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 OR10V1Q8NGI7 309 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 SAP25Q8TEE9 199 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 TMEM18Q96B42 140 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 UCK1Q9HA47 277 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 ERRFI1Q9UJM3 462 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PCNX2A6NKB5 2137 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 RNF212BA8MTL3 300 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 DYNLT3P51808 116 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PMP22Q01453 160 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 TMEM267Q0VDI3 215 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 HABP2Q14520 560 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-201ENST00000244728 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 SPSB1Q96BD6 273 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 POM121Q96HA1 1249 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 DOK5Q9P104 306 aa8.09□□□□□ -1.11
COL21A1-201ENST00000244728 PMS2P1A4D2B8 440 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-201ENST00000244728 MELTFP08582 738 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 HES1Q14469 280 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 PLPPR5Q32ZL2 321 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 ATP1A1-AS1Q5TC04 95 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 CYB561D1Q8N8Q1 229 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 ERGIC1Q969X5 290 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 GGACTQ9BVM4 153 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 GPR61Q9BZJ8 451 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 SH3BGRL3Q9H299 93 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 HEATR1Q9H583 2144 aaKnown RBP8.08□□□□□ -1.12
COL21A1-201ENST00000244728 NKX2-6A6NCS4 301 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 GEMIN2O14893 280 aaKnown RBP8.08□□□□□ -1.12
COL21A1-201ENST00000244728 TRGC2P03986 189 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 LIFP15018 202 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 GNG3P63215 75 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-201ENST00000244728 HIKESHIQ53FT3 197 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 GFRALQ6UXV0 394 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 C22orf15Q8WYQ4 148 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 DNASE2BQ8WZ79 361 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 ADIPOR1Q96A54 375 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 HES7Q9BYE0 225 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 OR51I2Q9H344 312 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 RAB9BQ9NP90 201 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 OR5H1A6NKK0 313 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 TMEM14DPA8MWL7 114 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 H0YL77 283 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 STARD6P59095 220 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 HTD2P86397 168 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 RUNX1Q01196 453 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 MPV17LQ2QL34 196 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 BIVMQ86UB2 503 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 OR10AD1Q8NGE0 317 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 SMIM8Q96KF7 97 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 RARRES2Q99969 163 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 COA4Q9NYJ1 87 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 PSENENQ9NZ42 101 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 CACFD1Q9UGQ2 172 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 IL17BQ9UHF5 180 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 ZNF391Q9UJN7 358 aa8.08□□□□□ -1.12
COL21A1-201ENST00000244728 TCF20Q9UGU0 1960 aaKnown RBP8.08□□□□□ -1.12
COL21A1-201ENST00000244728 IGHV3-43A0A0B4J1X8 118 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 MDFIC2A0A1B0GVS7 189 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 IGHV3-43DP0DP04 118 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-201ENST00000244728 ADCYAP1P18509 176 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 VOPP1Q96AW1 172 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 ARV1Q9H2C2 271 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 FAM206AQ9NX38 181 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 HEATR5AQ86XA9 2040 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-201ENST00000244728 XKRY2A2RUG3 117 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 AQP7P3A6NL99 342 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 F8VVB4 439 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 F8VWA3 439 aa8.07□□□□□ -1.12
COL21A1-201ENST00000244728 NKX2-8O15522 239 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms