RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ABHD17BQ5VST6 288 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM182Q6ZP80 229 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-202ENST00000244303 GAPTQ8N292 157 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF565Q8N9K5 539 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM56Q96MV1 263 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF251Q9BRH9 671 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM56-RWDD3S4R434 201 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 IGKV1D-13A0A0B4J2D9 117 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 NGFP01138 241 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 IGKV1-13P0DP09 117 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 MAGEA5P43359 124 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-202ENST00000244303 DHRS13Q6UX07 377 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 SAXO1Q8IYX7 474 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 SELENOHQ8IZQ5 122 aaKnown RBP12.32□□□□□ -0.44
HIF3A-202ENST00000244303 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
HIF3A-202ENST00000244303 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF552Q9H707 407 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-202ENST00000244303 A0A1B0GV50 99 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SLC22A20A6NK97 555 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 TRAPPC2LH3BP13 241 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 UBE2CO00762 179 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SYNGR4O95473 234 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 MT-ND4LP03901 98 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SPINK2P20155 84 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 RAB5CP51148 216 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 CLINT1Q14677 625 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SRSF7Q16629 238 aaKnown RBP eCLIP12.31□□□□□ -0.44
HIF3A-202ENST00000244303 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 GSN-AS1Q9NRJ2 163 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
HIF3A-202ENST00000244303 AHCTF1Q8WYP5 2266 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 HSD17B6O14756 317 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 ADAM20O43506 726 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SYNGR1O43759 233 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SSSCA1O60232 199 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 ITGA3P26006 1051 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 PAX6P26367 422 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 RND3P61587 244 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 RAB1AP62820 205 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 RNF212Q495C1 297 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 AWAT1Q58HT5 328 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 DCAF10Q5QP82 559 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
HIF3A-202ENST00000244303 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 A6NLC8 198 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 SS18L1O75177 396 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-202ENST00000244303 COX5BP10606 129 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 OMGP23515 440 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 LMO1P25800 156 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
HIF3A-202ENST00000244303 TGIF1Q15583 401 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 CXorf66Q5JRM2 361 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-202ENST00000244303 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 MKXQ8IYA7 352 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 TCEAL7Q9BRU2 100 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 TTTY12Q9BZ98 90 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 PLA2G3Q9NZ20 509 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 IL17BQ9UHF5 180 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 MED13Q9UHV7 2174 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 K7N7A8 449 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 TUSC2O75896 110 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 OR1C1Q15619 314 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 LURAP1LQ8IV03 231 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 APH1AQ96BI3 265 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF488Q96MN9 340 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 SPIN2AQ99865 258 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 SPIN2BQ9BPZ2 258 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 ABI3Q9P2A4 366 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
HIF3A-202ENST00000244303 NCOR1O75376 2440 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 A0A1W2PPH5 198 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 C3orf80F5H4A9 247 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 TXNL1O43396 289 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 TNFSF15O95150 251 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 DAOP14920 347 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 KIR2DS4P43632 304 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 C3AR1Q16581 482 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 HES3Q5TGS1 186 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 LINC00696Q6ZRV3 163 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 POM121L2Q96KW2 1035 aa12.29□□□□□ -0.44
HIF3A-202ENST00000244303 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms