RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SPIN2AQ99865 258 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 SPIN2BQ9BPZ2 258 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 UBE2J1Q9Y385 318 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 AQP7O14520 342 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 RHBDL1O75783 438 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 ACAA1P09110 424 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 SEC11BP0C7V7 166 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 MDH2P40926 338 aaKnown RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 LPAR6P43657 344 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 SPIN3Q5JUX0 258 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 MEX3BQ6ZN04 569 aaKnown RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 VASH2Q86V25 355 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF695Q8IW36 515 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 CMTM1Q8IZ96 169 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 C17orf78Q8N4C9 275 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 GINS3Q9BRX5 216 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 LRFN3Q9BTN0 628 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 NKX6-2Q9C056 277 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-201ENST00000237186 OR51B6Q9H340 312 aa13.76□□□□□ -0.21
UBE3D-201ENST00000237186 TRAV17A0A0B4J275 112 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 HSPB6O14558 160 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 HS3ST1O14792 307 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 TSPAN4O14817 238 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 DEGS1O15121 323 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 ADCYAP1P18509 176 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 HLA-DRB3P79483 266 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
UBE3D-201ENST00000237186 GNMTQ14749 295 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 SPATA46Q5T0L3 261 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 WDR86Q86TI4 376 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 H1FOOQ8IZA3 346 aaPredicted RBP13.75□□□□□ -0.21
UBE3D-201ENST00000237186 SPAG16Q8N0X2 631 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 SVBPQ8N300 66 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 OR2J1Q9GZK6 312 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 CDH20Q9HBT6 801 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 CCL28Q9NRJ3 127 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 RCL1Q9Y2P8 373 aaKnown RBP13.75□□□□□ -0.21
UBE3D-201ENST00000237186 POLDIP2Q9Y2S7 368 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 OR2W1Q9Y3N9 320 aa13.75□□□□□ -0.21
UBE3D-201ENST00000237186 FAM186AA6NE01 2351 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 BORCS7-ASMTA0A0B4J1R7 106 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 PIGBOS1A0A0B4J2F0 54 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 H0Y980 276 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 SIGLEC5O15389 551 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 MED6O75586 246 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 CELA3BP08861 270 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 SELEP16581 610 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 VDAC1P21796 283 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 LILRB1Q8NHL6 650 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-201ENST00000237186 RDH5Q92781 318 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 BSCL2Q96G97 398 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-201ENST00000237186 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 HRH4Q9H3N8 390 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 WFDC1Q9HC57 220 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 FAM212BQ9NTI7 297 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-201ENST00000237186 UQCC1Q9NVA1 299 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 FBXO24O75426 580 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 CBR1P16152 277 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 IDH3GP51553 393 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-201ENST00000237186 F2RL1P55085 397 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 UCP2P55851 309 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF146Q15072 292 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 MOB1BQ7L9L4 216 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 SCCPDHQ8NBX0 429 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 OR5D13Q8NGL4 314 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 KIRREL1Q96J84 757 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 TSNAXQ99598 290 aaKnown RBP13.74□□□□□ -0.21
UBE3D-201ENST00000237186 NRIP2Q9BQI9 281 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 SMIM3Q9BZL3 60 aa13.74□□□□□ -0.21
UBE3D-201ENST00000237186 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-201ENST00000237186 TRIM77I1YAP6 450 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 PGLYRP1O75594 196 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-201ENST00000237186 IGKV3-15P01624 115 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 CD5P06127 495 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 DANCRP0C864 163 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 SPP1P10451 314 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 COX5AP20674 150 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 NKX2-1P43699 371 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-201ENST00000237186 NOVA1P51513 510 aaKnown RBP13.73□□□□□ -0.21
UBE3D-201ENST00000237186 ARHGDIBP52566 201 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 AKR1C2P52895 323 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 AKR1C1Q04828 323 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 C1orf162Q8NEQ5 155 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-201ENST00000237186 OR10J5Q8NHC4 309 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 SLC25A40Q8TBP6 338 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 WNT2BQ93097 391 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 TRIB1Q96RU8 372 aa13.73□□□□□ -0.21
UBE3D-201ENST00000237186 TMEM210A6NLX4 147 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 LYZL6O75951 148 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 MMP9P14780 707 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF44P15621 663 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 WT1P19544 449 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 TUBG1P23258 451 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms