RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 HTR1DP28221 377 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 GNG3P63215 75 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 ZNF124Q15973 351 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 TMEM97Q5BJF2 176 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 LPAR5Q9H1C0 372 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 CCL28Q9NRJ3 127 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
HCFC2-201ENST00000229330 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 UPK3AO75631 287 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 CRYAAP02489 173 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 SERF2P84101 59 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 C2orf68Q2NKX9 166 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 A0A0G2JK05 382 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 MGAT2Q10469 447 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 SPINK9Q5DT21 86 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 ZNF774Q6NX45 483 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
HCFC2-201ENST00000229330 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 SPEM1Q8N4L4 309 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 CFHR5Q9BXR6 569 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 OCIAD1Q9NX40 245 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 TAAR3PQ9P1P4 343 aa12.13□□□□□ -0.47
HCFC2-201ENST00000229330 A0A1W2PR80 420 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 PTPMT1Q8WUK0 201 aaPredicted RBP12.12□□□□□ -0.47
HCFC2-201ENST00000229330 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 PRDX4Q13162 271 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 Q8IYB0 196 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 TUBD1Q9UJT1 453 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 BGLAPP02818 100 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 Q56UQ5 140 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 H1FXQ92522 213 aaKnown RBP12.12□□□□□ -0.47
HCFC2-201ENST00000229330 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 P4HTMQ9NXG6 502 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 SPTY2D1-AS1A0A0U1RR47 76 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
HCFC2-201ENST00000229330 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 SRD5A3Q9H8P0 318 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 NGFP01138 241 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 P2RX4Q99571 388 aa12.12□□□□□ -0.47
HCFC2-201ENST00000229330 C1orf100Q5SVJ3 147 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
HCFC2-201ENST00000229330 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 APCSP02743 223 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 ZNF343Q6P1L6 599 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 SPACA9Q96E40 222 aaPredicted RBP12.11□□□□□ -0.47
HCFC2-201ENST00000229330 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
HCFC2-201ENST00000229330 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 SCCPDHQ8NBX0 429 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 FCGR3BO75015 233 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
HCFC2-201ENST00000229330 CRYBA2P53672 197 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 BPIFA4PQ86YQ2 179 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
HCFC2-201ENST00000229330 UBE2CO00762 179 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 ZNF32P17041 273 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 OR2D2Q9H210 308 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 GLB1P16278 677 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 NDUFB7P17568 137 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
HCFC2-201ENST00000229330 SH3BGRL3Q9H299 93 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 PLPPR5Q32ZL2 321 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
HCFC2-201ENST00000229330 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 SRSF10O75494 262 aaKnown RBP12.1□□□□□ -0.47
HCFC2-201ENST00000229330 FHITP49789 147 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 RAB7AP51149 207 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 DSCR4P56555 118 aaPredicted RBP12.1□□□□□ -0.47
HCFC2-201ENST00000229330 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 LINC00696Q6ZRV3 163 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
HCFC2-201ENST00000229330 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
HCFC2-201ENST00000229330 CYR61O00622 381 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 CNIH1O95406 144 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 BCL2L2Q92843 193 aaPredicted RBP12.09□□□□□ -0.47
HCFC2-201ENST00000229330 SLC7A10Q9NS82 523 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 A0A1W2PQD3 144 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 RAB29O14966 203 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 WDFY1Q8IWB7 410 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 LRRC61Q9BV99 259 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 NEURL1O76050 574 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms