RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MSI2Q96DH6 328 aaKnown RBP14.36□□□□□ -0.11
GAPDH-201ENST00000229239 DMRTA2Q96SC8 542 aa14.36□□□□□ -0.11
GAPDH-201ENST00000229239 BARX1Q9HBU1 254 aaPredicted RBP14.36□□□□□ -0.11
GAPDH-201ENST00000229239 NSG2Q9Y328 171 aa14.36□□□□□ -0.11
GAPDH-201ENST00000229239 GPR31O00270 319 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 LILRA1O75019 489 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 JTBO76095 146 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 CDS2O95674 445 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 KCNJ3P48549 501 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 IDH3GP51553 393 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-201ENST00000229239 PHLDA2Q53GA4 152 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 IGSF11Q5DX21 431 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 GPR157Q5UAW9 335 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ZNF880Q6PDB4 577 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 LDLRAD3Q86YD5 345 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 GCNT2Q8N0V5 402 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ABHD17AQ96GS6 310 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 HS3ST6Q96QI5 342 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 SPIN2AQ99865 258 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 SPIN2BQ9BPZ2 258 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 PLSCR4Q9NRQ2 329 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 LYZL6O75951 148 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 IGKV3-15P01624 115 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 HKR1P10072 659 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 RPL12P30050 165 aaKnown RBP14.35□□□□□ -0.11
GAPDH-201ENST00000229239 UCP2P55851 309 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ZNF169Q14929 603 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ACSF3Q4G176 576 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-201ENST00000229239 CMTM1Q8IZ96 169 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 BATF2Q8N1L9 274 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 C9orf106Q8NAJ2 232 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 GLYATL2Q8WU03 294 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 SAT2Q96F10 170 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ABHD14BQ96IU4 210 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 OR51B6Q9H340 312 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 ZC4H2Q9NQZ6 224 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 TAS2R3Q9NYW6 316 aa14.35□□□□□ -0.11
GAPDH-201ENST00000229239 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 DEGS1O15121 323 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 EIF2S3LQ2VIR3 472 aaKnown RBP14.34□□□□□ -0.11
GAPDH-201ENST00000229239 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 FIP1L1Q6UN15 594 aaKnown RBP14.34□□□□□ -0.11
GAPDH-201ENST00000229239 CNEP1R1Q8N9A8 125 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 MRPL30Q8TCC3 161 aaKnown RBP14.34□□□□□ -0.11
GAPDH-201ENST00000229239 MARC2Q969Z3 335 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 TMEM56Q96MV1 263 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 TMEM222Q9H0R3 208 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 ZNF71Q9NQZ8 489 aaPredicted RBP14.34□□□□□ -0.11
GAPDH-201ENST00000229239 IL36RNQ9UBH0 155 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 TMEM56-RWDD3S4R434 201 aa14.34□□□□□ -0.11
GAPDH-201ENST00000229239 TRAV24A0A0B4J272 114 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.33□□□□□ -0.11
GAPDH-201ENST00000229239 NPIPB11E5RHQ5 1161 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 MKRN2OSH3BPM6 223 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 PHF1O43189 567 aaPredicted RBP14.33□□□□□ -0.11
GAPDH-201ENST00000229239 CELA3BP08861 270 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 GNRHRP30968 328 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 ERVK11-1P61568 191 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 P2RY6Q15077 328 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 SPIN3Q5JUX0 258 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 SPATA46Q5T0L3 261 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 FAM169BQ8N8A8 192 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 SLC25A40Q8TBP6 338 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 IL22RA2Q969J5 263 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 NARFLQ9H6Q4 476 aa14.33□□□□□ -0.11
GAPDH-201ENST00000229239 MED12LQ86YW9 2145 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 ST8SIA3O43173 380 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 WNT2P09544 360 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 SCTP09683 121 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 SP6Q3SY56 376 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 MYPOPQ86VE0 399 aaPredicted RBP14.33□□□□□ -0.12
GAPDH-201ENST00000229239 SPERTQ8NA61 448 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 OR1J1Q8NGS3 322 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 KIRREL1Q96J84 757 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.12
GAPDH-201ENST00000229239 ADAT1Q9BUB4 502 aaKnown RBP14.33□□□□□ -0.12
GAPDH-201ENST00000229239 KCNAB3O43448 404 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 ZNF205O95201 554 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 P2RY1P47900 373 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 HLA-DRB3P79483 266 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 Q6P435 159 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 WDR31Q8NA23 367 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 NRIP2Q9BQI9 281 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 BCL2L14Q9BZR8 327 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 TENM4Q6N022 2769 aa14.32□□□□□ -0.12
GAPDH-201ENST00000229239 BET1O15155 118 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 PGA5P0DJD9 388 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 MZT1Q08AG7 82 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 ZNF146Q15072 292 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 C1QTNF12Q5T7M4 302 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 LYZL2Q7Z4W2 148 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 SCCPDHQ8NBX0 429 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 OR11L1Q8NGX0 322 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 ARL11Q969Q4 196 aa14.31□□□□□ -0.12
GAPDH-201ENST00000229239 ZNF488Q96MN9 340 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms