RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CLDN14O95500 239 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 ASAH2BP0C7U1 165 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 NKX6-2Q9C056 277 aaPredicted RBP16.08■□□□□ 0.17
CLIP2-201ENST00000223398 AKIRIN1Q9H9L7 192 aaPredicted RBP16.08■□□□□ 0.17
CLIP2-201ENST00000223398 C17orf51A8MQB3 221 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 DXOO77932 396 aaKnown RBP16.08■□□□□ 0.17
CLIP2-201ENST00000223398 PRSS23O95084 383 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 PPP1R32Q7Z5V6 425 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 PRSS27Q9BQR3 290 aa16.08■□□□□ 0.17
CLIP2-201ENST00000223398 PPP1R2P9O14990 202 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 PTP4A3O75365 173 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 ACP1P24666 158 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 CHRDL1Q9BU40 450 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 MMP7P09237 267 aaPredicted RBP16.08■□□□□ 0.16
CLIP2-201ENST00000223398 FCER1GP30273 86 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 PAX5Q02548 391 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 LIAT1Q6ZQX7 453 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 VWCEQ96DN2 955 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 CA10Q9NS85 328 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 IGHV3-72A0A0B4J1Y9 119 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 CEACAM1P13688 526 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 ATP5J2P56134 94 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 RFLNBQ8N5W9 214 aa16.08■□□□□ 0.16
CLIP2-201ENST00000223398 SPTBN2O15020 2390 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 G3V3Q6 166 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 TCEAL7Q9BRU2 100 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 ARID1AO14497 2285 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
CLIP2-201ENST00000223398 G6PCP35575 357 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 ZBTB44Q8NCP5 570 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 OR5R1Q8NH85 324 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 SRXN1Q9BYN0 137 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 RNF122Q9H9V4 155 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 SPINK4O60575 86 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 PCMT1P22061 227 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 ZP4Q12836 540 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 CABLES2Q9BTV7 478 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 TTRP02766 147 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 HLA-DRB3P79483 266 aa16.07■□□□□ 0.16
CLIP2-201ENST00000223398 SMAD7O15105 426 aaKnown RBP16.06■□□□□ 0.16
CLIP2-201ENST00000223398 PPYP01298 95 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 VSIG8P0DPA2 414 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 SCAND1P57086 179 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 FUT5Q11128 374 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 GZMMP51124 257 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 ZNF705AQ6ZN79 300 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-201ENST00000223398 GOLT1BQ9Y3E0 138 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 TO15178 435 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 PGA4P0DJD7 388 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 SPP1P10451 314 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 MMP16P51512 607 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 MPV17LQ2QL34 196 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 OR2C3Q8N628 320 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 GPR137Q96N19 417 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 MIA3Q5JRA6 1907 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 FGF8P55075 233 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-201ENST00000223398 DHRS7BQ6IAN0 325 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-201ENST00000223398 DYNLRB2Q8TF09 96 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 C2CD4CQ8TF44 421 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 MYOFQ9NZM1 2061 aa16.06■□□□□ 0.16
CLIP2-201ENST00000223398 PJVKQ0ZLH3 352 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 MIDNQ504T8 468 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 RABAC1Q9UI14 185 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 ABHD17AQ96GS6 310 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 SLC45A2Q9UMX9 530 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 ZNF519Q8TB69 540 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 SIGLEC12Q96PQ1 595 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 RNF115Q9Y4L5 304 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 ANKRD20A5PA0PJZ0 165 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 TET1Q8NFU7 2136 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 MRGPRFQ96AM1 343 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 SCN10AQ9Y5Y9 1956 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 CYB5R3P00387 301 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-201ENST00000223398 CEBPDP49716 269 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-201ENST00000223398 FAM219AQ8IW50 185 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 OR1K1Q8NGR3 316 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 ZNF714Q96N38 554 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 ASCL3Q9NQ33 180 aa16.05■□□□□ 0.16
CLIP2-201ENST00000223398 CTSDP07339 412 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-201ENST00000223398 C8orf82Q6P1X6 216 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-201ENST00000223398 SCARF2Q96GP6 870 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-201ENST00000223398 GABRA6Q16445 453 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 SSMEM1Q8WWF3 244 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 WFDC6Q9BQY6 131 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 PIPOXQ9P0Z9 390 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 C9orf172C9J069 976 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 NANOS3P60323 173 aaKnown RBP16.04■□□□□ 0.16
CLIP2-201ENST00000223398 TEX30Q5JUR7 227 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 RAXQ9Y2V3 346 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 KIR3DL2P43630 455 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
CLIP2-201ENST00000223398 MAP1LC3B2A6NCE7 125 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 HAX1O00165 279 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 CELA3AP09093 270 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 EFNB2P52799 333 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 MAP1LC3BQ9GZQ8 125 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms