RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TRDV1A0A1B0GX56 115 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 FAM181BA6NEQ2 426 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 ZNF729A6NN14 1252 aaPredicted RBP10.29□□□□□ -0.76
LSM5-201ENST00000223084 ODF3BA8MYP8 253 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 KCNJ3P48549 501 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 CLDN12P56749 244 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 UNC119Q13432 240 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 NEDD8Q15843 81 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 RAB11BQ15907 218 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 PLA1AQ53H76 456 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 ZNF626Q68DY1 528 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 SLC35E4Q6ICL7 350 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 RAB12Q6IQ22 244 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 HEPN1Q6WQI6 88 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 DYNAPQ8N1N2 210 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 OR6M1Q8NGM8 313 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 CCDC107Q8WV48 283 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 DYRK2Q92630 601 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 CST11Q9H112 138 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 TMEM133Q9H2Q1 129 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 NCOR1P1Q9H4R4 102 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 PLGRKTQ9HBL7 147 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 CALYQ9NYX4 217 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 RCC2Q9P258 522 aaKnown RBP10.29□□□□□ -0.76
LSM5-201ENST00000223084 GHRLQ9UBU3 117 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 PEX16Q9Y5Y5 336 aa10.29□□□□□ -0.76
LSM5-201ENST00000223084 KBTBD11-OT1A0A1B0GTJ5 212 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 TMEM30CPA0ZSE6 113 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 UBE2QL1A1L167 161 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 TMEM14DPA8MWL7 114 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 MCRIP1C9JLW8 97 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 SLC17A2O00624 439 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 IGHV3-7P01780 117 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 UBBP0CG47 229 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 HKR1P10072 659 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 FUT3P21217 361 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 NFYBP25208 207 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 OR10A3P58181 314 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
LSM5-201ENST00000223084 QRFPP83859 136 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 PAX5Q02548 391 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 LTC4SQ16873 150 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 HES5Q5TA89 166 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 ABHD12Q8N2K0 398 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 ZNF565Q8N9K5 539 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 BEND2Q8NDZ0 799 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 SSX3Q99909 188 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 NICN1Q9BSH3 213 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 CLEC7AQ9BXN2 247 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 TMEM59Q9BXS4 323 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 ZNF286AQ9HBT8 521 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 POMT1Q9Y6A1 747 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 V9GY05 133 aa10.28□□□□□ -0.76
LSM5-201ENST00000223084 TRAV1-2A0A0B4J238 106 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 SMIM30A4D0T7 59 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A10PA6NDY2 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A18PA6NE21 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A16PA6NEW6 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A20PA6NIJ5 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A8PA6NJQ4 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A7PA6NKC0 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A22PA8MWA6 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A12PA8MX19 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A5PA8MXJ8 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A23PA8MXZ1 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 H3BUX3 64 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 GPR137BO60478 399 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 PDCD6O75340 191 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 BPNT1O95861 308 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 MT-ND4P03905 459 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A15PP0C7V4 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A13PP0C7W8 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A14PP0C7W9 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 FAM90A24PP0C7X0 464 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 ARSBP15848 533 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 JUNBP17275 347 aaPredicted RBP10.27□□□□□ -0.77
LSM5-201ENST00000223084 MYL9P24844 172 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 SSTR5P35346 364 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 SSX2Q16385 188 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 NKAPLQ5M9Q1 402 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 SYT6Q5T7P8 510 aaPredicted RBP10.27□□□□□ -0.77
LSM5-201ENST00000223084 C12orf54Q6X4T0 127 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 ZNF497Q6ZNH5 498 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 OR51D1Q8NGF3 324 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 OR4K15Q8NH41 348 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 KCNG3Q8TAE7 436 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 LEAP2Q969E1 77 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 KIRREL1Q96J84 757 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 OR51E2Q9H255 320 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 SPACA1Q9HBV2 294 aa10.27□□□□□ -0.77
LSM5-201ENST00000223084 TXNL4BQ9NX01 149 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms