RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GABRA6Q16445 453 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 ZNF260Q3ZCT1 412 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 GNG7O60262 68 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 IGHA2P01877 340 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 TAS2R45P59539 299 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 DHODHQ02127 395 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 SSX1Q16384 188 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 Q6ZNX1 250 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 KLF14Q8TD94 323 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 CDCA4Q9BXL8 241 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 GZMHP20718 246 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 PMELP40967 661 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 CDK5Q00535 292 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
SIX4-201ENST00000216513 SLC17A5Q9NRA2 495 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 FGF2P09038 288 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
SIX4-201ENST00000216513 PHYHD1Q5SRE7 291 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 TCTAP57738 103 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 FAM27BQ5VT28 67 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 ANGPTL6Q8NI99 470 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
SIX4-201ENST00000216513 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 DLL3Q9NYJ7 618 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 MS4A18H0YCH9 400 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 LANCL1O43813 399 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 PRB1P04280 392 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 MS4A18Q3C1V0 323 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 Q71RC1 249 aaPredicted RBP11.93□□□□□ -0.5
SIX4-201ENST00000216513 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
SIX4-201ENST00000216513 JMJD8Q96S16 334 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 CNTD2Q9H8S5 307 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 OR1A1Q9P1Q5 309 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 DFFBO76075 338 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 SLC25A4P12235 298 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 ETV6P41212 452 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
SIX4-201ENST00000216513 K7ENP7 123 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 OR2F1Q13607 317 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 IMMP1LQ96LU5 166 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 AAMDCQ9H7C9 122 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 ZNF629Q9UEG4 869 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 SLC17A2O00624 439 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 FFAR1O14842 300 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 EAF1Q96JC9 268 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 OR2C1O95371 312 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 OR5B3Q8NH48 314 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 FGF20Q9NP95 211 aaPredicted RBP11.92□□□□□ -0.5
SIX4-201ENST00000216513 MGAMO43451 1857 aa11.92□□□□□ -0.5
SIX4-201ENST00000216513 EIF3GO75821 320 aaKnown RBP eCLIP11.91□□□□□ -0.5
SIX4-201ENST00000216513 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 PNLIPRP3Q17RR3 467 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 PIGYQ3MUY2 71 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 OR8G5Q8NG78 346 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 OR4S2Q8NH73 311 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 HGDQ93099 445 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 CCDC190Q86UF4 302 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 PRSS23O95084 383 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 LINC00271P0C7V0 271 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 SMIM10L1P0DMW3 83 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 C12orf73Q69YU5 71 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 SMIM10Q96HG1 83 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 ZNF331Q9NQX6 463 aaPredicted RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 CRYBB2P43320 205 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 PECRQ9BY49 303 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 DUSP21Q9H596 190 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 C20orf202A1L168 122 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 ADRA2CP18825 462 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 DEFA6Q01524 100 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 MGAT2Q10469 447 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 VSTM2AQ8TAG5 236 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms