RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 AUP1Q9Y679 476 aa16.66■□□□□ 0.26
RHBDD3-201ENST00000216085 M0R1W7 72 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 RAB27BO00194 218 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 HNF1AP20823 631 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 TMEM200BQ69YZ2 307 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 ZNF497Q6ZNH5 498 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 ZNF714Q96N38 554 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 SULT4A1Q9BR01 284 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 FAAP24Q9BTP7 215 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 PECRQ9BY49 303 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 RIMS4Q9H426 269 aaPredicted RBP16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 RAB9BQ9NP90 201 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 ADAM30Q9UKF2 790 aa16.65■□□□□ 0.26
RHBDD3-201ENST00000216085 FOXI3A8MTJ6 420 aaPredicted RBP16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 SERPINE3A8MV23 424 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 APOA1P02647 267 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 HIST1H1DP16402 221 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 GLP1RP43220 463 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 PAX8Q06710 450 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 DCUN1D5Q9BTE7 237 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 CHMP1AQ9HD42 196 aaPredicted RBP16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 TRAPPC2LQ9UL33 140 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 HIVEP2P31629 2446 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 A0A075B6Q4 140 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 RGS5O15539 181 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 ZNF728P0DKX0 622 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 TMEM50BP56557 158 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 ARF6P62330 175 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 MOGAT2Q3SYC2 334 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 TAS2R3Q9NYW6 316 aa16.64■□□□□ 0.25
RHBDD3-201ENST00000216085 TOX4O94842 621 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 CD3GP09693 182 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 ZNF273Q14593 569 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 CNPY1Q3B7I2 92 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 PLAC9Q5JTB6 97 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 C6orf183Q5T699 404 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 TRAT1Q6PIZ9 186 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 C1orf122Q6ZSJ8 110 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 CORO2AQ92828 525 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 WDFY2Q96P53 400 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 C6orf62Q9GZU0 229 aaPredicted RBP16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 METTL8Q9H825 291 aaKnown RBP16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 C12orf4Q9NQ89 552 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 TMEM160Q9NX00 188 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 ARHGAP32A7KAX9 2087 aa16.63■□□□□ 0.25
RHBDD3-201ENST00000216085 ZNF729A6NN14 1252 aaPredicted RBP16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 FAM25AB3EWG3 89 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 FAM25CB3EWG5 89 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 FAM25GB3EWG6 89 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 RBP4P02753 201 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 GSTP1P09211 210 aaKnown RBP16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 GNB3P16520 340 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 TALDO1P37837 337 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 CR1LQ2VPA4 569 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 TMEM69Q5SWH9 247 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 MOB1BQ7L9L4 216 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 MCFD2Q8NI22 146 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 CMSS1Q9BQ75 279 aaKnown RBP16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 TMPRSS13Q9BYE2 586 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 AK3Q9UIJ7 227 aa16.62■□□□□ 0.25
RHBDD3-201ENST00000216085 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 MT-ND4P03905 459 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 GZMHP20718 246 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 MNDAP41218 407 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 GAPTQ8N292 157 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 DYRK2Q92630 601 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 PCGF1Q9BSM1 259 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 SLIRPQ9GZT3 109 aaKnown RBP16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 KCNIP1Q9NZI2 227 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 MGAT4AQ9UM21 535 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 MFNGO00587 321 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 HPGDSO60760 199 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 CCL3L1P16619 93 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 CDK2P24941 298 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 PITPNAQ00169 270 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 CDNFQ49AH0 187 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 OR4K15Q8NH41 348 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 MRGPRDQ8TDS7 321 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 CCDC107Q8WV48 283 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 GSX1Q9H4S2 264 aaPredicted RBP16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 OPN4Q9UHM6 478 aa16.61■□□□□ 0.25
RHBDD3-201ENST00000216085 TRAV18A0A075B6X5 111 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 XRCC3O43542 346 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 CLPXO76031 633 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 ERVFRD-1P60508 538 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 PNLIPRP3Q17RR3 467 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 NCR3LG1Q68D85 454 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 TCF23Q7RTU1 214 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 OR13A1Q8NGR1 328 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 MRPL30Q8TCC3 161 aaKnown RBP16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 SIRPDQ9H106 197 aa16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 ZMAT3Q9HA38 289 aaKnown RBP16.6■□□□□ 0.25
RHBDD3-201ENST00000216085 MEX3AA1L020 520 aaKnown RBP16.59■□□□□ 0.25
RHBDD3-201ENST00000216085 EIF4EP06730 217 aaKnown RBP16.59■□□□□ 0.25
RHBDD3-201ENST00000216085 GNG2P59768 71 aa16.59■□□□□ 0.25
RHBDD3-201ENST00000216085 ZNF554Q86TJ5 538 aa16.59■□□□□ 0.25
RHBDD3-201ENST00000216085 SETD6Q8TBK2 473 aa16.59■□□□□ 0.25
RHBDD3-201ENST00000216085 A3GALT2U3KPV4 340 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms