RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR4P4Q8NGL7 312 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 OR10S1Q8NGN2 331 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 MTCH2Q9Y6C9 303 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 RER1O15258 196 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 ZP1P60852 638 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
VCL-201ENST00000211998 MAFAQ8NHW3 353 aaPredicted RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 DNAJB12Q9NXW2 375 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 PEF1Q9UBV8 284 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 OR4C45A6NMZ5 311 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 TNFSF11O14788 317 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 PDCD6O75340 191 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 DHRS3O75911 302 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 HIST1H1BP16401 226 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 GABRG2P18507 467 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 IGFBP6P24592 240 aaPredicted RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 OTX1P32242 354 aaPredicted RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 PRRX1P54821 245 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 WFDC8Q8IUA0 241 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 DDX60LQ5H9U9 1706 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 LINC01565O15544 149 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 P2RY4P51582 365 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 UBE2L3P68036 154 aaKnown RBP9.2□□□□□ -0.94
VCL-201ENST00000211998 AQP10Q96PS8 301 aa9.2□□□□□ -0.94
VCL-201ENST00000211998 NHSL1Q5SYE7 1610 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 OR2W5A6NFC9 320 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 HPRT1P00492 218 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 C21orf58P58505 322 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 CCL7P80098 99 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 FOXF1Q12946 379 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 GPA33Q99795 319 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 MYO9BQ13459 2157 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 IGHV3-15A0A0B4J1V0 119 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 MPZL1O95297 269 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 P01737 135 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 MT-ND6P03923 174 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ZNF137PP52743 207 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 OR8B3Q8NGG8 313 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ABHD3Q8WU67 409 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 STARD10Q9Y365 291 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 PAPPA2Q9BXP8 1791 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 A0A096LPE4 126 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 UBE2CO00762 179 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 FCGR3BO75015 233 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ZNF793Q6ZN11 406 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ADTRPQ96IZ2 230 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 TMEM204Q9BSN7 226 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 GAL3ST2Q9H3Q3 398 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 CCL27Q9Y4X3 112 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 LRRC3CA6NJW4 275 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
VCL-201ENST00000211998 GCSHP23434 173 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 MPLP40238 635 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 ARL17AQ8IVW1 177 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 WNT16Q9UBV4 365 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
VCL-201ENST00000211998 TMEM210A6NLX4 147 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 SP1P08047 785 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 SNRPCP09234 159 aaKnown RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 B4GALT1P15291 398 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 EFNB1P98172 346 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 INSM1Q01101 510 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 IL11RAQ14626 422 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 GAPTQ8N292 157 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 APCDD1LQ8NCL9 501 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 KISS1RQ969F8 398 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 APOBEC3DQ96AK3 386 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 ZNF256Q9Y2P7 627 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 TMEM265A0A087WTH1 108 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 HOXC4P09017 264 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 SMIM17P0DL12 118 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 CEBPDP49716 269 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 MFAP2P55001 183 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 MUC15Q8N387 334 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 NPEPL1Q8NDH3 523 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 OR2Y1Q8NGV0 311 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 PLPPR2Q96GM1 343 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 TNFSF10P50591 281 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 TMEM50BP56557 158 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 MEF2BQ02080 365 aaPredicted RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 ZNF117Q03924 483 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 RIGQ13278 110 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 ANKRD55Q3KP44 614 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 AAMDCQ9H7C9 122 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 CLDN16Q9Y5I7 305 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 TRAV17A0A0B4J275 112 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 NDUFB4O95168 129 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 ACTL6AO96019 429 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 C9orf50Q5SZB4 431 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 SSMEM1Q8WWF3 244 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 HSD17B10Q99714 261 aaKnown RBP9.18□□□□□ -0.94
VCL-201ENST00000211998 MFRPQ9BY79 579 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms