RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ABCA4P78363 2273 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 CCL1P22362 96 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 TUBG1P23258 451 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF133P52736 654 aaPredicted RBP12.97□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF100Q8IYN0 542 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF808Q8N4W9 903 aaPredicted RBP12.97□□□□□ -0.33
EFNB1-201ENST00000204961 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 TMEM54Q969K7 222 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 HIST1H2AAQ96QV6 131 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 FAM234AQ9H0X4 552 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 GNG13Q9P2W3 67 aa12.97□□□□□ -0.33
EFNB1-201ENST00000204961 MPPED1O15442 326 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 OR8G2PQ6IF36 304 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 CPNE4Q96A23 557 aaPredicted RBP12.96□□□□□ -0.33
EFNB1-201ENST00000204961 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
EFNB1-201ENST00000204961 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 TECTAO75443 2155 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 TUSC2O75896 110 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 VAMP5O95183 116 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 S100A8P05109 93 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 METTL15P1P0C7V9 234 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
EFNB1-201ENST00000204961 ERVS71-1P61550 626 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 MPV17LQ2QL34 196 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 DPPA2Q7Z7J5 298 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 MCEMP1Q8IX19 187 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 ASB13Q8WXK3 278 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 S100PBPQ96BU1 408 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 UFSP2Q9NUQ7 469 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 CACFD1Q9UGQ2 172 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 TCFL5Q9UL49 500 aa12.96□□□□□ -0.33
EFNB1-201ENST00000204961 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.33
EFNB1-201ENST00000204961 NPIPB13A6NJU9 1138 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 NPIPB4C9JG80 1138 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 LAMTOR5O43504 91 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 NR2C1P13056 603 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 NAAAQ02083 359 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 ZNF561Q8N587 486 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 AURKAIP1Q9NWT8 199 aaPredicted RBP12.96□□□□□ -0.34
EFNB1-201ENST00000204961 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.34
EFNB1-201ENST00000204961 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 TMEM50AO95807 157 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 MMP9P14780 707 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 SULT1A1P50225 295 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 STARD6P59095 220 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 GGNQ86UU5 652 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 CT55Q8WUE5 264 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 MTCH1Q9NZJ7 389 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
EFNB1-201ENST00000204961 S100PP25815 95 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 RBM11P57052 281 aaKnown RBP12.95□□□□□ -0.34
EFNB1-201ENST00000204961 RAB2AP61019 212 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 IL15RAQ13261 267 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 FAM189A2Q15884 450 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 RFESDQ8TAC1 157 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 CA5BP1Q8WTZ4 195 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 PILRBQ9UKJ0 227 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 TACC2O95359 2948 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 RAB5AP20339 215 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 CRYGSP22914 178 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 TAGLN2P37802 199 aaKnown RBP12.95□□□□□ -0.34
EFNB1-201ENST00000204961 SNCAP37840 140 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 PMP22Q01453 160 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 DMBX1Q8NFW5 382 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 MSI2Q96DH6 328 aaKnown RBP12.95□□□□□ -0.34
EFNB1-201ENST00000204961 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 GLRX2Q9NS18 164 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 PRSS50Q9UI38 385 aa12.95□□□□□ -0.34
EFNB1-201ENST00000204961 DEFB108AA8MXU0 73 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 OR2C1O95371 312 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 SERPINE2P07093 398 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 PSG2P11465 335 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 RAB11AP62491 216 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 KIAA0141Q14154 515 aaPredicted RBP12.94□□□□□ -0.34
EFNB1-201ENST00000204961 EXT1Q16394 746 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 ALKBH6Q3KRA9 238 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
EFNB1-201ENST00000204961 LHFPL2Q6ZUX7 228 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 PPP1R32Q7Z5V6 425 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 SPSB1Q96BD6 273 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 TM2D1Q9BX74 207 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
EFNB1-201ENST00000204961 PRO1933Q9H354 126 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
EFNB1-201ENST00000204961 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
EFNB1-201ENST00000204961 FOSL1P15407 271 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms