RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 IGHV3-20A0A0C4DH32 117 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 ALG1L2C9J202 215 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 HRASP01112 189 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 TTRP02766 147 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 PPBPP02775 128 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 GLI4P10075 376 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 PGCP20142 388 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 TSPO2Q5TGU0 170 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 CDCP2Q5VXM1 449 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 LIAT1Q6ZQX7 453 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 CPEB2Q7Z5Q1 589 aaKnown RBP12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 STPG4Q8N801 248 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 TSTD1Q8NFU3 115 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 OR10A2Q9H208 303 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 GLRX2Q9NS18 164 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 NAT8Q9UHE5 227 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
TMEM38A-201ENST00000187762 A0A1W2PR77 199 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 MMDQ15546 238 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 OR8G2PQ6IF36 304 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 WDFY1Q8IWB7 410 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 H1FOOQ8IZA3 346 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 IFI44Q8TCB0 444 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 DECR2Q9NUI1 292 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 PRSS50Q9UI38 385 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 COA3Q9Y2R0 106 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 LOC105371242A0A075B767 164 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 ONECUT2O95948 504 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 DYNLT3P51808 116 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CST9LP1Q5W188 147 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CISD2Q8N5K1 135 aaKnown RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 TOMM40LQ969M1 308 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CCDC74BQ96LY2 380 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 RASL10BQ96S79 203 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 ZNF319Q9P2F9 582 aa12.85□□□□□ -0.35
TMEM38A-201ENST00000187762 CBY3A6NI87 242 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 NPIPB7O75200 414 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 OR5G3P0C626 314 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 ARL4DP49703 201 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 CFHR1Q03591 330 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 FMODQ06828 376 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 OGFOD3Q6PK18 319 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 NUP54Q7Z3B4 507 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 OR5AS1Q8N127 324 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 NUDT10Q8NFP7 164 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 P2RX4Q99571 388 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 PECRQ9BY49 303 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 TXNIPQ9H3M7 391 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 LILRA1O75019 489 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 IGHEP01854 428 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 TYMSP04818 313 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 ZNF20P17024 532 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 MTCP1P56278 107 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 BSXQ3C1V8 233 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 ABCA11PQ4W5N1 156 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 ZNF787Q6DD87 383 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 C17orf82Q86X59 251 aaPredicted RBP12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 LIME1Q9H400 295 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 FAM206AQ9NX38 181 aa12.84□□□□□ -0.35
TMEM38A-201ENST00000187762 PROB1E7EW31 1015 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 PLPP3O14495 311 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 MT-ATP6P00846 226 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CARD18P57730 90 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 ARL6IP1Q15041 203 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CYP2G1PQ6ZSU1 146 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 Q6ZWC4 215 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF845Q96IR2 970 aaPredicted RBP12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 B3GALT1Q9Y5Z6 326 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms