RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TRAT1Q6PIZ9 186 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 GAR1Q9NY12 217 aaKnown RBP16.44■□□□□ 0.22
MBD3-201ENST00000156825 NAGKQ9UJ70 344 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 A0A1W2PN81 502 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 NGFRP08138 427 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 NSUN5P2Q63ZY6 315 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 COMMD1Q8N668 190 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 OR4F17Q8NGA8 305 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 GSTZ1O43708 216 aaPredicted RBP16.44■□□□□ 0.22
MBD3-201ENST00000156825 TIAF1O95411 115 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 OR4A8P0C604 315 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 ZNF561Q8N587 486 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 OR1B1Q8NGR6 318 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 IL17BQ9UHF5 180 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 OOEPA6NGQ2 149 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 CDCP2Q5VXM1 449 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 LIPGQ9Y5X9 500 aa16.44■□□□□ 0.22
MBD3-201ENST00000156825 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
MBD3-201ENST00000156825 B4E171 279 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 CRYBA1P05813 215 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 TSPAN7P41732 249 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 LIMS1P48059 325 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 ATRXP46100 2492 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 LRRC3CA6NJW4 275 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 DAOP14920 347 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 VDAC1P21796 283 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 KLF9Q13886 244 aaPredicted RBP16.43■□□□□ 0.22
MBD3-201ENST00000156825 MYPOPQ86VE0 399 aaPredicted RBP16.43■□□□□ 0.22
MBD3-201ENST00000156825 OR5A2Q8NGI9 324 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 GMPPAQ96IJ6 420 aaPredicted RBP16.43■□□□□ 0.22
MBD3-201ENST00000156825 OPN4Q9UHM6 478 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 K7ESF4 209 aa16.43■□□□□ 0.22
MBD3-201ENST00000156825 CTDSPLO15194 276 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 DHRS9Q9BPW9 319 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 NAT8BQ9UHF3 227 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 PRSS50Q9UI38 385 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 CD200P41217 278 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 ZNF826PQ6ZT77 177 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 DTD1Q8TEA8 209 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 SRP14P37108 136 aaKnown RBP16.42■□□□□ 0.22
MBD3-201ENST00000156825 TMEM241Q24JQ0 296 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 PCDHGA9Q9Y5G4 932 aaKnown RBP16.42■□□□□ 0.22
MBD3-201ENST00000156825 TRAPPC1Q9Y5R8 145 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 J3KRW8 73 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 CAMPP49913 170 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 FAM27BQ5VT28 67 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 TMEM18Q96B42 140 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 SLC35B3Q9H1N7 401 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
MBD3-201ENST00000156825 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 CLRN3Q8NCR9 226 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 PILRBQ9UKJ0 227 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 ANKRD34CP0C6C1 535 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 PSG2P11465 335 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 CEACAM3P40198 252 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 MPV17LQ2QL34 196 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 SLC23A3Q6PIS1 610 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 FGF11Q92914 225 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 TMUB1Q9BVT8 246 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 CA10Q9NS85 328 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 ARG1P05089 322 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 TGIF2LYQ8IUE0 185 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 COA4Q9NYJ1 87 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 SLC45A2Q9UMX9 530 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 MMP7P09237 267 aaPredicted RBP16.41■□□□□ 0.22
MBD3-201ENST00000156825 GZMHP20718 246 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 GNG4P50150 75 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 RHOBP62745 196 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 MOGAT2Q3SYC2 334 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 INO80CQ6PI98 192 aaPredicted RBP16.41■□□□□ 0.22
MBD3-201ENST00000156825 ISOC2Q96AB3 205 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 GPHA2Q96T91 129 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 C12orf57Q99622 126 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 GDF15Q99988 308 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 CHRDL1Q9BU40 450 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 KCNK7Q9Y2U2 307 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 TCL1AP56279 114 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 UBE2L3P68036 154 aaKnown RBP16.41■□□□□ 0.22
MBD3-201ENST00000156825 CLPPQ16740 277 aaPredicted RBP16.41■□□□□ 0.22
MBD3-201ENST00000156825 SLC25A42Q86VD7 318 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 OR8B3Q8NGG8 313 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 NEIL1Q96FI4 390 aaPredicted RBP16.41■□□□□ 0.22
MBD3-201ENST00000156825 LURAP1Q96LR2 239 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 OR8B2Q96RD0 313 aa16.41■□□□□ 0.22
MBD3-201ENST00000156825 A0A1W2PPC1 479 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 KIAA1324LA8MWY0 1029 aaPredicted RBP16.4■□□□□ 0.22
MBD3-201ENST00000156825 FOSL1P15407 271 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 RCC2Q9P258 522 aaKnown RBP16.4■□□□□ 0.22
MBD3-201ENST00000156825 INSIG2Q9Y5U4 225 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 TCAPO15273 167 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 SMIM17P0DL12 118 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 FKBP11Q9NYL4 201 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 VSIG4Q9Y279 399 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 OR2W1Q9Y3N9 320 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 COL6A6A6NMZ7 2263 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
MBD3-201ENST00000156825 HARBI1Q96MB7 349 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 GALR1P47211 349 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 HLA-DRB3P79483 266 aa16.4■□□□□ 0.22
MBD3-201ENST00000156825 FAM78BQ5VT40 261 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms