RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Sapcd1Q9CY86 146 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Q9CYS6 286 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 MrnipQ9D1F5 335 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Tceal6Q9DB24 200 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Ppp1r1aQ9ERT9 171 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 A0A286YD13 301 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Trav13d-3J3QMG8 112 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Klk1b5P15945 261 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 DaoP18894 345 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Kcnj3P63250 501 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Zfp819Q80V81 607 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Tssk5Q8C1R0 372 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Nectin4Q8R007 508 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Vmn1r89Q8R256 316 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1100Q8VFM1 321 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1038Q8VGS1 319 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Med6Q921D4 246 aaKnown RBP14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Pop4Q9CR08 221 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 St6galnac5Q9QYJ1 336 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Celsr3Q91ZI0 3301 aa14.43□□□□□ -0.1
Shh-201ENSMUST00000002708 Tmem200bD3Z0P8 284 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm2663F6R7E8 247 aaKnown RBP14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Epha8O09127 1004 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 EnamO55196 1274 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Drd3P30728 446 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 N4bp2l1Q3V2Q8 238 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr145Q60882 310 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 OmgQ63912 440 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 TxnipQ8BG60 397 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 RtbdnQ8QZY4 247 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Vmn1r19Q8R2C7 308 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Yif1aQ91XB7 293 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 1810009J06RikQ9CPN7 247 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 4933400A11RikQ9CR52 288 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr455A0A0B4J1M2 317 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Fam98cE9PYD1 344 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm5798F7BTS7 198 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Zfp2P08043 459 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm9125P0DMR6 365 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 SryQ05738 395 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr107Q7TRK4 309 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Cacfd1Q8BG21 171 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Fam234bQ8BYI8 624 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Coro2aQ8C0P5 524 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Depp1Q8K2F3 205 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Vmn1r217Q8R270 298 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1279Q8VF38 313 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 NanpQ9CPT3 248 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Mrps28Q9CY16 186 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 OxsmQ9D404 459 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 P2ry4Q9JJS7 361 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm14444A2ARW3 426 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Rabl2E9Q9D5 223 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Prss12O08762 761 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Ndufb11O09111 151 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 P01882 290 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Mpzl1Q3TEW6 270 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 ZpbpQ62522 350 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Svs6Q64356 99 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1014Q7TR95 305 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1013Q7TR96 305 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Pif1Q80SX8 650 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Las2Q8CB14 526 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1086Q8VFL9 310 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 MynnQ99MD8 610 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 NosipQ9D6T0 301 aaKnown RBP14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Ascl3Q9JJR7 174 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Dusp13Q9QYJ7 198 aa14.42□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm2026A2ART4 498 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 D7Ertd443eD2J0Y4 644 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Prrt2E9PUL5 346 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Fam53aE9PV82 402 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Ccdc74aE9Q9U8 364 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 H2-M1F7CXU4 344 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Cbr2P08074 244 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Gabrg3P27681 467 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Tmem69Q3KQJ0 245 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm7534Q3UU21 679 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Csnk2a1Q60737 391 aaKnown RBP14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Commd3Q63829 195 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Il17fQ7TNI7 161 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Sh2d7Q8BI17 458 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Dcp1aQ91YD3 602 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Snu13Q9D0T1 128 aaKnown RBP14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Ppp1r35Q9D8C8 260 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr716Q9EPG6 314 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Cpn1Q9JJN5 457 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 GltpQ9JL62 209 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Fbxo6Q9QZN4 295 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 B3GNT2Q9Z222 397 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Ighv1-43A0A0A6YXN5 117 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Zfp36l2P23949 484 aaKnown RBP14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Lbx1P52955 282 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 AgrpP56473 131 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Dnase2P56542 353 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Rab3cP62823 227 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Ext1P97464 746 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 BC061237Q6P8I2 184 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 EnkurQ6SP97 255 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 SetmarQ80UJ9 309 aa14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms